Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02116 ATGGGTAATTGTTGCGCTACCCCTCCGGTAACCGGAGAAGAaacaaacaacaacaaaaagaaaaacaacaaaaaACCTAAAAAGGAAAATCCCTTCGCAATCGATTACAATTTCAACGCGAACAACACGAACTCAAAACTCACCGTTTTGAAGGATCCAACGGGACGCGAAATCGAGGTTCGATACGAGCTAGGTCGTGAACTAGGTCGAGGCGAGTTCGGAATAACGTACCTCTGTACGGACAAAGAAAACGGAGAAGAACTAGCGTGTAAGTCGATATCGAAGAAGAAGCTAAGAACATTGGTGGATATTGAAGATGTTAGGAGAGAAGTTGAAATAATGAAACACATGCCCAAACATCCTAATATTGTTACGTTGAAAGATACTTATGAAGATGATAATGCTGTTCACCTTGTTATGGAGCTTTGTGAAGGTGGTGAACTTTTTGATCGGATTGTTGCGCGTGGTCATTATACTGAACGCGCCGCCGCCGCTGTTACCAAAACCATCGTTGAAGTTGTTCAGATGTGCCACAAACACGGAGTGATGCATAGGGATCTCAAGCCTGAGAACTTTTTGTTTGCAAATAAGAAGGAGACAGCAGCATTGAAAGCTATAGATTTTGGATTGTCAGTGTTTTTTACACCAGGGGAAAAATTTAATGAGATAGTTGGAAGTCCATATTACATGGCTCCTGAGGTATTGAAGCGAAATTACGGCCCAGAGGTTGATATCTGGAGTGCTGGAGTAATTCTATACATCTTACTTTGTGGTGTCCCTCCATTTTGGGCAGAAACTGAGCAAGGAGTTGCACAAGCAATCATACGATCTGTTGTTGATTTCAAAAGGGATCCATGGCCTAAAGTTTCCGATAATGCAAAAGACCTTGTGAAGAGGATGCTAAATCCCGACCCTAAGCGGCGACTTACTGCACAGGAAGTATTAGATCATCCATGGTTACAAAATGCAAAGAAAGCTCCCAATGTTTCATTAGGAGAAACAGTTAGAGCAAGGCTTAAGCAATTTTCCGTAATGAACAAGCTTAAGAAAAGAGCTTTGAGGGTCATTGCAGAGCATTTGTCAGTAGAAGAAGCTGCTGGACTAAAAGAGGGATTCAAGCTCATGGATACAAGCAACAAAGGCAAGATTAACATTGATGAGCTGCGAATAGGATTGCATAAACTAGGCCATCAAATTCCTGATGCAGATGTCCAGATTCTTATGGAAGCTGTGAGTTTTACGATTACCCTTTATCTGGATTCTTATATCGCCACATTTGATAGTTAA 1287 0.4087 MGNCCATPPVTGEETNNNKKKNNKKPKKENPFAIDYNFNANNTNSKLTVLKDPTGREIEVRYELGRELGRGEFGITYLCTDKENGEELACKSISKKKLRTLVDIEDVRREVEIMKHMPKHPNIVTLKDTYEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTKTIVEVVQMCHKHGVMHRDLKPENFLFANKKETAALKAIDFGLSVFFTPGEKFNEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVVDFKRDPWPKVSDNAKDLVKRMLNPDPKRRLTAQEVLDHPWLQNAKKAPNVSLGETVRARLKQFSVMNKLKKRALRVIAEHLSVEEAAGLKEGFKLMDTSNKGKINIDELRIGLHKLGHQIPDADVQILMEAVSFTITLYLDSYIATFDS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02116 428 SUPERFAMILY Protein kinase-like (PK-like) 61 329 IPR011009 -
Car03g02116 428 Pfam Protein kinase domain 62 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02116 428 SMART serkin_6 62 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02116 428 Gene3D Phosphorylase Kinase; domain 1 64 147 - -
Car03g02116 428 SUPERFAMILY EF-hand 349 411 IPR011992 -
Car03g02116 428 Gene3D - 329 419 - -
Car03g02116 428 MobiDBLite consensus disorder prediction 1 30 - -
Car03g02116 428 CDD STKc_CAMK 61 319 - -
Car03g02116 428 ProSiteProfiles EF-hand calcium-binding domain profile. 363 398 IPR002048 GO:0005509
Car03g02116 428 PANTHER SERINE/THREONINE-PROTEIN KINASE 21 420 - -
Car03g02116 428 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 32-LIKE 21 420 - -
Car03g02116 428 ProSiteProfiles Protein kinase domain profile. 62 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02116 428 Gene3D Transferase(Phosphotransferase) domain 1 148 328 - -
Car03g02116 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Car03g02116 428 ProSitePatterns Protein kinases ATP-binding region signature. 68 91 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02116 Car-Chr3 67396403 67400933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02116 1 421 EF-hand Containing Proteins AT3G57530 78.873 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Car03g02116 Pkinase 3.8e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02116 K13412 - gmx:100790745 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02116 03 67396403 67400933 Car04g02237 04 32071593 32077935 PCT