Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02108 atggagaTTATGGGCTTGTTGTATGTTGTGTTAGGTTGGTATCTTTCAAATGGTGTTTTTGTGTGTGCTGAGTTCAAGGACCAAGCTATATTACATGCAATTAATCAAGAGCTTAGAGTTCCTGAATGGAGTGATGCAAAAATTTCAGATTACTGCACTTGGCAAGGGGTAAGTTGTGGCAATCATTCAATGGTGGAGAAGCTTGATCTTGCTCACAAGAATCTTAAAGGTAATGTGACTTTAATGTCTGAACTCAAAAGTTTGAAGCTACTTGATCTTTCAAATAATAACTTTGGTGGATTGATTCCTCCTTCTTTTGGAACTTTATCTGAGCTTGAAGTTCTAGATTTGTCTTCTAATAAGTTTGAAGGTTCAATTCCATCACAGTTTGGTGGTCTCACAAGTCTAAAATCATTGAACCTTTCTAATAATTTGCTTGTTGGTGAGTTACCAATGGAACTTCATGGCTTAGAGAAATTGCAAGACTTGCAACTTTCTAGTAATCAATTGAGTGGTTTTATACCTTCTTGGGTTAGTAATCTGACCAATTTGAGAGTTTTTTCGGCTTATGAGAATAGTTTAGACGGCAGGATTCCGAATGATTTAGGCTTGATTCGTGAACTTCAAATACTAAACCTTCATTCTAACCAACTTGAAGGTCCAATACCAGCAAGTATTTTTGCTTCAGGAAAGTTAGAAGTTCTGGTTCTCACTCAGAATAATTTTAGTGGTGATTTACCTGAGGAAATTGGGAATTGTCATGCCCTTTCAAGCATTAGAATTGGAAACAATCATCTTGTAGGTACTATTCCTAAGACCATTGGAAATCTCAGTAGCCTAACATACTTTGAAGCTGATAATAATAATCTTTCTGGTGAGGTAGCGTCGGAATTTGCTCGGTGTTCTAATCTCACCCTCTTGAATTTAGCTTCGAATGGATTTTCTGGGACTATTCCGCAAGAATTTGGACAACTTATGAACCTTCAGGAATTGATTTTGTCTGGAAATAGCTTATTCGGTGATATTCCAAAATCAATTCTCAGTTGCAAAAGTCTTAACAAGCTTGATATTAGCAACAACAGATTCAATGGAACGATACCAAATGAAATCTGCAATATTTCTCGGCTGCAATACTTGTTGTTGAATCTGAATTCCATAAGAGGGGAGATCCCTCATGAAATTGGAAATTGTGCAAAGCTTCTTCAGTTACAATTGGGAAGTAATTATTTGACCGGAACTATCCCTCCTGAGATCGGTCGCATCAGGAACTTACAGATAGCTTTAAATTTGAGCTTCAATCATCTCCATGGACCACTGCCAACAGAATTGGGAAAACTCGACAAACTTGTTTCTCTCGATGTTTCAAACAATCGGCTCTCAGGTAATATCCCGGCTGAGCTTAAGGGAATGTTGAGCTTGATCGAGGTGAACTTCTCGAACAATCTGTTTGGAGGTCCTATACCAACATTTGTACCGTTTCAGAAGAGTCCTAGTTCAAGTTTTTTCAGCAATGAAGGGCTTTGTGGAGAGCCATTGAATTCTTCATGTGGAGATCTTTATGATGATCACAGTAATTACCATCACAAGGTTTCTTACAGAATCATACTGGCTGTAATTGGTTCTGGTTTAGCAGTTTTTACGTCGGTAACTGTAGTTGTCTTGCTGTTTATGATCAGAGAGAGGCAAGAAAAAGCAGCCAAAGAGGCTGCTGGGATGGTTGATGATGCAACCGATGATAAACCAACTATAATAGCAGGAACAGTTTTCGTTGATAATTTAAAACAAGCAGTGGACCTTGATGCTGTTGTTAACGCAACACTGAAAGATTCGAATAAGCTCAGCAGCGGAACTTTCAGCGCAGTTTACAAAGCAACCATGCCTTCTGGTGTGATCTTATCAGTTAGGAGACTGAAGTCTGTGGACAAGACAATAATCCACCATCAGAACAAGATGATTAGAGAACTTGAAAGGCTAAGCAAAGTTTGTCATGAGAATCTAGTGCGGCCGATCGGATATGTCATTTACGAAGATGTTGCTCTTCTCTTGCATAATTATTTTCCAAACGGAACATTGTCTCAGCTTCTTCATGAATCTACCAAGCAACCTGACTATCAGCCTGACTGGTCAGCTAGGCTATCGATTGCCATTGGTGTGGCAGAAGGCTTGGCTTTCCTTCATCATGTCACGATTATCCATCTTGACATTTCTTCTGGCAATGTTCTTTTGGATTCAAACTTCAAGCCATTGGTTGGAGAAATTGAGATTTCGAAACTTCTTGATCCAACCAAAGGCACCGGAAGTATTAGTGCAGTTGCCGGTTCGTTCGGTTACATACCTCCAGAATATGCATACACCATGCAAGTGACAGCACCAGGAAATGTTTACAGCTATGGCGTTGTTTTGTTGGAAATCCTTACAACTCGACAACCTGTTGAAGAAGATTTTGGCGAAGGCGTAGATTTGGTCAAGTGGGTTCATAGTGCTCCTTTAAGAGGAGAAACTCCAGAGCAGATACTTGATGCAAGGCTTAGTACAGTTTCCTTTGGTTGGAGGAAAGAAATGCTTGCTGCTCTAAAAGTTGCATTGCTTTGCACTGACAACACACCAGCCAAACGACCAAAAATGAAGAATGTCGTAGAAATGCTTCGGGAGATCAAGTAA 2661 0.395 MEIMGLLYVVLGWYLSNGVFVCAEFKDQAILHAINQELRVPEWSDAKISDYCTWQGVSCGNHSMVEKLDLAHKNLKGNVTLMSELKSLKLLDLSNNNFGGLIPPSFGTLSELEVLDLSSNKFEGSIPSQFGGLTSLKSLNLSNNLLVGELPMELHGLEKLQDLQLSSNQLSGFIPSWVSNLTNLRVFSAYENSLDGRIPNDLGLIRELQILNLHSNQLEGPIPASIFASGKLEVLVLTQNNFSGDLPEEIGNCHALSSIRIGNNHLVGTIPKTIGNLSSLTYFEADNNNLSGEVASEFARCSNLTLLNLASNGFSGTIPQEFGQLMNLQELILSGNSLFGDIPKSILSCKSLNKLDISNNRFNGTIPNEICNISRLQYLLLNLNSIRGEIPHEIGNCAKLLQLQLGSNYLTGTIPPEIGRIRNLQIALNLSFNHLHGPLPTELGKLDKLVSLDVSNNRLSGNIPAELKGMLSLIEVNFSNNLFGGPIPTFVPFQKSPSSSFFSNEGLCGEPLNSSCGDLYDDHSNYHHKVSYRIILAVIGSGLAVFTSVTVVVLLFMIRERQEKAAKEAAGMVDDATDDKPTIIAGTVFVDNLKQAVDLDAVVNATLKDSNKLSSGTFSAVYKATMPSGVILSVRRLKSVDKTIIHHQNKMIRELERLSKVCHENLVRPIGYVIYEDVALLLHNYFPNGTLSQLLHESTKQPDYQPDWSARLSIAIGVAEGLAFLHHVTIIHLDISSGNVLLDSNFKPLVGEIEISKLLDPTKGTGSISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRQPVEEDFGEGVDLVKWVHSAPLRGETPEQILDARLSTVSFGWRKEMLAALKVALLCTDNTPAKRPKMKNVVEMLREIK 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02108 886 SMART LRR_typ_2 205 229 IPR003591 -
Car03g02108 886 SMART LRR_typ_2 133 156 IPR003591 -
Car03g02108 886 SMART LRR_typ_2 373 397 IPR003591 -
Car03g02108 886 SMART LRR_typ_2 157 181 IPR003591 -
Car03g02108 886 SMART LRR_typ_2 85 108 IPR003591 -
Car03g02108 886 SMART LRR_typ_2 446 469 IPR003591 -
Car03g02108 886 SMART LRR_typ_2 325 349 IPR003591 -
Car03g02108 886 SMART LRR_typ_2 109 132 IPR003591 -
Car03g02108 886 Gene3D Ribonuclease Inhibitor 272 523 IPR032675 -
Car03g02108 886 Gene3D Ribonuclease Inhibitor 23 174 IPR032675 -
Car03g02108 886 ProSiteProfiles Protein kinase domain profile. 607 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g02108 886 Pfam Leucine rich repeat 87 146 IPR001611 GO:0005515
Car03g02108 886 PRINTS Leucine-rich repeat signature 88 101 - -
Car03g02108 886 PRINTS Leucine-rich repeat signature 109 122 - -
Car03g02108 886 SUPERFAMILY L domain-like 253 512 - -
Car03g02108 886 CDD STKc_IRAK 613 885 - -
Car03g02108 886 Gene3D Ribonuclease Inhibitor 175 271 IPR032675 -
Car03g02108 886 Gene3D Transferase(Phosphotransferase) domain 1 686 886 - -
Car03g02108 886 Gene3D Phosphorylase Kinase; domain 1 575 685 - -
Car03g02108 886 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 886 - -
Car03g02108 886 SUPERFAMILY Protein kinase-like (PK-like) 606 882 IPR011009 -
Car03g02108 886 Pfam Leucine Rich Repeat 327 349 IPR001611 GO:0005515
Car03g02108 886 SUPERFAMILY L domain-like 35 293 - -
Car03g02108 886 Pfam Protein tyrosine and serine/threonine kinase 610 882 IPR001245 GO:0004672|GO:0006468
Car03g02108 886 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE TYROSINE-PROTEIN KINASE PXC3 1 886 - -
Car03g02108 886 ProSitePatterns Tyrosine protein kinases specific active-site signature. 730 742 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02108 Car-Chr3 67325536 67329592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02108 4 886 Receptor kinase-like Gene Family AT2G41820 72.203 0.0 1283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car03g02108 PK_Tyr_Ser-Thr 9.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02108 - - gmx:100789684 1476.46