Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02095 ATGGCTTCGTCTTCCTCCGATCCCGGCAAGTCCGCGGAGACTTCAGAAGCCCTGGCGGCTGCGAACGATCAACTTTTGCTGTACAGAGGATTGAAGAAAGCGAAGAAAGAGAGAGGTTGTACTGCCAAAGAACGAATCAGCAAAATGCCTCCATGTGCTGCTGGTAAACGCAGCTCCATCTACCGCGGTGTCACCAGGCATAGATGGACTGGTCGTTATGAAGCACATCTTTGGGATAAAAGTACATGGAACCAAAATCAGAATAAGAAAGGAAAGCAAGTTTACTTGGGGGCATATGATGATGAGGAAGCAGCGGCTAGAGCGTATGACCTTGCTGCTCTGAAATATTGGGGTCCTGGGACTCTCATTAACTTCCCAGTGACTGATTATACAAGAGATCTTGAAGAAATGCAGAACGTTTCGAGAGAAGAATACCTCGCGTCTTTGCGACGGAAGAGCAGTGGTTTTTCAAGAGGACTGTCAAAATATCGCGGACTATCCAGTCGATGGGAGCCATCATATGGCCGAATGGCTGGATCTGATTACTTCAGTAGTATACATTATGGTACAGGGGATGATTCAGCTGCGGAAAGTGAGTATGTTAGTGGTTTCTGCATAGAAAGAAAGATTGATTTAACAAATCACATCAAATGGTGGGGATCTAATAAAAATCGACAATCTGATGCTGGAACAAGATTATCAGAAGAAAAGAAACATGGTTTTGCTGGAGATATCTACAGTGAACTTAAAACATTGGAACAGAAAGTCCAACCAACAGAACCATATAAGATGCCTGAGTTAGGACGGCTCCACAATGATAAAAAACATAAAAGTTCTTCAATGTCAGCCTTAAGTATATTGTCACATTCTGCTGCTTACAAGAGCTTGCAAGAGAAAGTGACAAAGAAACCAGAAAATAGCGCTGGTAATGATGAAAATGAAAACAAAAATACAGTCAATGAGTTGGATCATGGGAAGGCAGTTGAGAAATCATCAAATCATGAAGGTGGCAATGATAGACTTGACATTGCAATGGGAATGAGTGGGGCGTTGTCTCTTCAAAGAAATGTTTACCCATTGACACCATTCTTGTCTGCACCACTGTTGACAGCATACAACACTGTTGATCCATTGGTAGATCCTGTTCTCTGGACATCTCTCGTTCCTATGCTTCCTGCCGGCCTTTCTCGTACAGCTGAGGTTACAAAGACTGAGACCGATTCAACATATACCATGTTTCAGCCAGAGGAGTGA 1254 0.433 MASSSSDPGKSAETSEALAAANDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSRGLSKYRGLSSRWEPSYGRMAGSDYFSSIHYGTGDDSAAESEYVSGFCIERKIDLTNHIKWWGSNKNRQSDAGTRLSEEKKHGFAGDIYSELKTLEQKVQPTEPYKMPELGRLHNDKKHKSSSMSALSILSHSAAYKSLQEKVTKKPENSAGNDENENKNTVNELDHGKAVEKSSNHEGGNDRLDIAMGMSGALSLQRNVYPLTPFLSAPLLTAYNTVDPLVDPVLWTSLVPMLPAGLSRTAEVTKTETDSTYTMFQPEE 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02095 417 MobiDBLite consensus disorder prediction 297 340 - -
Car03g02095 417 Pfam AP2 domain 60 118 IPR001471 GO:0003700|GO:0006355
Car03g02095 417 ProSiteProfiles AP2/ERF domain profile. 60 126 IPR001471 GO:0003700|GO:0006355
Car03g02095 417 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Car03g02095 417 PRINTS Ethylene responsive element binding protein signature 108 128 IPR001471 GO:0003700|GO:0006355
Car03g02095 417 SMART rav1_2 60 132 IPR001471 GO:0003700|GO:0006355
Car03g02095 417 SUPERFAMILY DNA-binding domain 59 127 IPR016177 GO:0003677
Car03g02095 417 Gene3D AP2/ERF domain 60 128 IPR036955 GO:0003700|GO:0006355
Car03g02095 417 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 8 415 - -
Car03g02095 417 PANTHER BNAA03G19580D PROTEIN 8 415 - -
Car03g02095 417 MobiDBLite consensus disorder prediction 297 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02095 Car-Chr3 67188206 67193016 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02095 19 401 AP2-EREBP Transcription Factor Family AT2G41710 67.949 1.36e-172 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car03g02095 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02095 K09285 - gmx:100786651 729.554