Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02050 ATGGTCATGGCTGCTGCAGAGTCACAATTTCATGTTTTGGCTGTTGATGACAGCATCATAGATAGGACACTTATTGAGAGGCTGCTCAAAACCTCTTCTTATCAAGTTACTACCGTTGATTCTGGTAGCAAGGCTTTAGAGTTTTTGGGTCTATGTGAAAATAATGAGACCAACCCAAATACACCATGTGTCTCTCCTAGCAATCATCAGGAAGTGGAAGTGAATCTTGTTATAACAGATTATTGTATGCCTGGCATGACAGGCTATGATTTGCTTAAGAAAATTAAGGAATCAACATCATTGAGAAACATACCAGTGGTGATTATGTCATCTGAGAATGTGCCTTCAAGGATTAATAGATGCTTAGAGGAAGGTGCAGAAGAATTTTTCTTGAAACCAGTAAGGCTATCAGATTTAAATAGACTTAAACCTCACATGAAGAAAACCAAATTGAAAGATCAAAAACAAGAAACAGAAGAAAAGGTTGAAAACTCAGAAattcaacagccagattcagaatcacattcacagacacaACAACAATCAGTACAACAAGGAACCACCAATAACAAGAGAAAGAGTATTGAACAAGGACTTTCTTCACCTGAGACTGACAGAACAAGACCAAGATACAGTACTGGTATAGCCACTGTTGTATGA 660 0.3545 MVMAAAESQFHVLAVDDSIIDRTLIERLLKTSSYQVTTVDSGSKALEFLGLCENNETNPNTPCVSPSNHQEVEVNLVITDYCMPGMTGYDLLKKIKESTSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLSDLNRLKPHMKKTKLKDQKQETEEKVENSEIQQPDSESHSQTQQQSVQQGTTNNKRKSIEQGLSSPETDRTRPRYSTGIATVV 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02050 219 SMART REC_2 10 143 IPR001789 GO:0000160
Car03g02050 219 MobiDBLite consensus disorder prediction 169 211 - -
Car03g02050 219 MobiDBLite consensus disorder prediction 145 219 - -
Car03g02050 219 Pfam Response regulator receiver domain 12 139 IPR001789 GO:0000160
Car03g02050 219 CDD REC_typeA_ARR 12 142 - -
Car03g02050 219 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 213 IPR045279 GO:0009736
Car03g02050 219 Coils Coil 148 168 - -
Car03g02050 219 MobiDBLite consensus disorder prediction 145 168 - -
Car03g02050 219 ProSiteProfiles Response regulatory domain profile. 11 147 IPR001789 GO:0000160
Car03g02050 219 Gene3D - 11 211 - -
Car03g02050 219 SUPERFAMILY CheY-like 9 142 IPR011006 -
Car03g02050 219 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 2 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02050 Car-Chr3 66716083 66718212 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02050 5 219 Response Regulator Gene Family AT3G57040 64.255 7.35e-97 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car03g02050 Response_reg 1.8e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02050 K14492 - gmx:100814494 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02050 03 66716083 66718212 Car03g02050 03 66716083 66718212 ECH