Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02039 ATGGTCACCAATAGATTGAAGAGGGAGCAATGCGACCGAACAAAACACGATTCTAGCTTCTCCCACTGGAAGATTCTTATTGGTCCTTCTGATTGGGAAGACTATTCCAAAGGAAAGGAAGGATCTACCAGATACAGGGTTCACAACCTTCCTCAGAAATTGGGTCCCGGAGTGTATGAGCTTGGAGTAGCTGTATCGCGTAGTGGCTTGGGGCGTGAAATCTACAAGCTTGCCGCTGACCCTCGTCGCATAATTGTGGTTTACCTTGGAAAAGCTGACAATGTGAGAGCAAGACTGCAGTGTTATGGCAGGAATGGAGCACATTTGGGTAATAGCTATTTGTCAGACGATTCTTCTCTTCAAATGGGAAGGTCATTGTTTCAGGAGATATTTTCACAAGGCTTCCCTATTGTTTATAGATGGGCTCCTATGCAAAACACTGGAGAAGCCCTGAGTACAGAAGCTCAGCTGCTTAGTACATTTGATTATGCATGGAACACTATCAAAAATGGTACACGGCGGCCTAACGATATTCTTGAAATGCTCAATAATTTTGCTTCAGGCACTACAACATTTTCAGATGTGGCCAAATTGCTTCTACCCTTCACTCAGAAGAAAGTGGGGATACCAATTAAATCGAGCAAGCTGCCTCTGACAGATGACAAATTAGACGAAGCTGATAATGGCAGATATAATTTCCTATCTCGTGTGTTCAAATTCAACAGGTCGCGCCCTAGAATAGTTCAAGATACCACTGATGGTGCCACTCACGAGAATGCTAAAATTTGTGGAGTAATGTTGGCAGATGGTTCTATTTGTAAAAGGCCACCAGTTGAAAAAAGAGTGAGGTGTCCTGAACACAAAGGAATGAGAAGAAATGTGTCTACTGCCAAAGCAAGTAGAGCACCCAAGGCTGAATTAGAAAGCATTGTAGGTAATGCCTATAGGTACCAAAATGTCAACCATGATGTAGAAGACCCTCCTCAAAAAGTGGTTGATAGTCATGTTGAGGAGAGTATCACCAAAACCATTATATGTGGAATCATCTTGGATGACGGGTCCACTTGTAGAAGACAACCGGTTAAAGGAAGAAAAAGGTGCCATGAACATAAAGGGAAAAGAATTCGGGCATCTATTCATACAAATCAGAAATAA 1155 0.4251 MVTNRLKREQCDRTKHDSSFSHWKILIGPSDWEDYSKGKEGSTRYRVHNLPQKLGPGVYELGVAVSRSGLGREIYKLAADPRRIIVVYLGKADNVRARLQCYGRNGAHLGNSYLSDDSSLQMGRSLFQEIFSQGFPIVYRWAPMQNTGEALSTEAQLLSTFDYAWNTIKNGTRRPNDILEMLNNFASGTTTFSDVAKLLLPFTQKKVGIPIKSSKLPLTDDKLDEADNGRYNFLSRVFKFNRSRPRIVQDTTDGATHENAKICGVMLADGSICKRPPVEKRVRCPEHKGMRRNVSTAKASRAPKAELESIVGNAYRYQNVNHDVEDPPQKVVDSHVEESITKTIICGIILDDGSTCRRQPVKGRKRCHEHKGKRIRASIHTNQK 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02039 384 Pfam GIY-YIG domain-containing protein 20 179 - -
Car03g02039 384 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 2 303 IPR038909 GO:0003677|GO:0006355
Car03g02039 384 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 328 379 IPR038909 GO:0003677|GO:0006355
Car03g02039 384 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 2 303 - -
Car03g02039 384 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 328 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02039 Car-Chr3 66609231 66613007 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02039 1 379 HRT Transcription Factor Family AT5G56780 41.902 3.24e-91 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Car03g02039 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02039 - - lang:109350609 488.419