Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02037 ATGTCAATGGAAGAGTCACTAAGATCTCTGTCTTTAGATTACTTAAACCTTCTAATAAATGGACAAGCCTTCAGCGACGTGGTATTCAGCGTGGAAGGGCGTTTAGTACACGCGCATAGATGCATATTAGCAGCAAGAAGTATGTTCTTCAGGAAATTCTTTTGTGGGCCAGAGCCAGCCTCAGGAGTACTAGACCCATCATCAGGAAACAGAGTTAACTCGGTTGGATCAACCAGGTCGGGTGTTATACCTGTTAACTCGGTAGGTTATGAAGTTTTCTTGTTGATGCTTCAGTTTCTCTATAGTGGACAAGTTTGTATTGTGCCTCAGAAACATGAAGCTAGGCCTAATTGTGGTGAACGTGCTTGTTGGCATACGCATTGTACATCAGCCGTTGATCTTGCTCTTGATACTCTCTCCGCCGCTAGATATTTTGGTGTTGAACAGCTCGCATTGCTCACTCAGAAACAACTAGCTAACATGGTAGAAAAAGCTTCAATTGAAGATGTAATGAAAGTGTTACTAGCATCAAGAAAACAAGACATGCAGCAATTATGGAGCACATGTTCCCACCTGGTAGCAAAATCAGGCCTACCTCCAGAAGTACTAGCAAAACACCTCCCTATTGACATCATAGCCAAAATAGAAGAGCTTCGTATGAAATCCTCTTTATCACGTCGCTCTTTAAATGCACACCATCGTCGTCACCCCCACGACCTCACTGCCGCAGCCGACCTAGAAGACCAAAAAATCCGCCGAATGAGACGAGCCCTCGACTCCTCGGATGTCGAACTCGTCAAACTCATGGTAATGGGAGAAGGCCTTAATCTCGACGAAGCATTAGCATTACCTTATGCCGTAGAGAATTGTAGTAGAGAAGTGGTCAAAGCTTTATTGGAACTCGGTGCAGCCGATGTGAACTTCCCGGCTGGTCCAACCGGTAAAACTCCGCTCCACATTGCCGCCGAGATGGTGTCCCCGGACATGGTTGCCGTGCTTCTTGACCACCATGCCGACCCGAATGTAAGAACGGTTGATGGTGTTACGCCATTGGATATTCTAAGAACCCTAACTTCAGATTTTCTGTTCAAAGGTGCTGTCCCTGGATTAACTCACATAGAACCAAACAAACTAAGGTTGTGTTTGGAGCTTGTTCAATCTGCAGCACTTGTTATGTCAAGAGAAGATGGGAATAATAATGCTAACAACAATAATGCAACTTCTTCTTCAGGAACAACTATGTATCCTCATATGAATGAAGATCATAGCCACAACAACAATATTAATAATAACCTTAACTTGGATTCAAGGTTGGTTTATCTTAACCTTGGTGCTAATCAAATCAGTTCGAGGATGGATTCTGGTGATGATGATAACAACCATAATAGTCAAAGGGAAGCTATCAACTCCTCCATGTatcatcatcatcatcactctcatGACTACTAA 1449 0.4293 MSMEESLRSLSLDYLNLLINGQAFSDVVFSVEGRLVHAHRCILAARSMFFRKFFCGPEPASGVLDPSSGNRVNSVGSTRSGVIPVNSVGYEVFLLMLQFLYSGQVCIVPQKHEARPNCGERACWHTHCTSAVDLALDTLSAARYFGVEQLALLTQKQLANMVEKASIEDVMKVLLASRKQDMQQLWSTCSHLVAKSGLPPEVLAKHLPIDIIAKIEELRMKSSLSRRSLNAHHRRHPHDLTAAADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDEALALPYAVENCSREVVKALLELGAADVNFPAGPTGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVMSREDGNNNANNNNATSSSGTTMYPHMNEDHSHNNNINNNLNLDSRLVYLNLGANQISSRMDSGDDDNNHNSQREAINSSMYHHHHHSHDY 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02037 482 Pfam BTB/POZ domain 16 111 IPR000210 GO:0005515
Car03g02037 482 Gene3D Potassium Channel Kv1.1; Chain A 2 195 IPR011333 -
Car03g02037 482 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 477 IPR044284 GO:0099402
Car03g02037 482 PANTHER REGULATORY PROTEIN NPR5 1 477 - -
Car03g02037 482 SMART BTB_4 25 162 IPR000210 GO:0005515
Car03g02037 482 ProSiteProfiles BTB domain profile. 25 109 IPR000210 GO:0005515
Car03g02037 482 ProSiteProfiles Ankyrin repeat region circular profile. 313 343 - -
Car03g02037 482 Pfam Domain of unknown function (DUF3420) 197 255 IPR024228 -
Car03g02037 482 SUPERFAMILY POZ domain 9 160 IPR011333 -
Car03g02037 482 Pfam Ankyrin repeats (3 copies) 261 343 IPR002110 GO:0005515
Car03g02037 482 MobiDBLite consensus disorder prediction 395 415 - -
Car03g02037 482 MobiDBLite consensus disorder prediction 451 482 - -
Car03g02037 482 ProSiteProfiles Ankyrin repeat profile. 313 345 IPR002110 GO:0005515
Car03g02037 482 SUPERFAMILY Ankyrin repeat 272 356 IPR036770 -
Car03g02037 482 CDD BTB_POZ_NPR_plant 8 162 - -
Car03g02037 482 Gene3D - 240 361 IPR036770 -
Car03g02037 482 SMART ANK_2a 278 308 IPR002110 GO:0005515
Car03g02037 482 SMART ANK_2a 313 342 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02037 Car-Chr3 66592934 66595896 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Car03g02037 BTB 1.5e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02037 K14508 - qsu:112012060 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02037 03 66592934 66595896 Car03g02037 03 66592934 66595896 ECH
Car03g02037 03 66592934 66595896 Car04g02312 04 35500075 35503986 PCT