Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02031 ATGGGTAGTAGACGTAGAATTGTAAACGTGAGCAGTGAAAACACTGACAAAGTTGTTAACGGGATGCCAAGCTACGCTCCTCCATTGCCTCCTAATTCCATGGGCATGGAAGGAACTAATATTCATCCTTCTCGAATTTCTGAATTTGGAGCCCTTGAACAATCTCTTGGATTTCGTGTTGAGGATGCCATGAATCTGAGCAGAAATCCAGTGTTTAATCAAATGAAATCAAATAGCCAAGCTTTAGGTGCCGATATTCAATTTGGTGCTTTAAGTAAGTCAATTGCAAACTCGGATATAAATCTCTCTGCTGCAATTGCTGGGTCTCAGACATTACAATTACAAAGAGACTCACAGCCAAATTTGGCTTCAACATCTGGTGGCCATCGTGAGAACTGGGGAGAGTCCAACATGGCTGATGGAAGCCCTGATACTTCAACAGATGATACAGAAGACAAAAATCGAATGCTTGAAAGGGGAGATTCAAGTGAAAGATCAAAAGATAAATCGGATCAAAAGACGTTAAGACGGCTAGCTCAAAATCGTGAGGCTGCCAGAAAAAGCCGACTGAGGAAAAAGGCATACGTGCAACAATTAGAGAGCAGTAGGCTGAAACTGACGCAACTGGAGCAAGAGCTACAGCGAGCACGCCAGCAGGGAATATTTATTTCAAGCACAGGAGAGCAGACCCATTCAATGAGTGGAAATGGCGCAATGGCATTTGATGTAGAATACGCACGATGGTTAGAAGAGCATAATAGGCAAACCAATGAGCTAAGGGCTGCAATAAATTCTCATGCTGGGGATATTGAACTCCGTACCATTGTCGACAATTTCATGACTCAATTTGAAGATATCTACAGGCTGAAAGGTATTGCAGCAAAAGCTGACGTTTTCCACATTCTATCAGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATAGGTGGCTTCCGCTCATCCGAACTTCTTAAGCTTCTAGTAAGTCATTTGGAGCCATTAACCGAGCAACAGTTAATGGGCATCTACAACTTGCAACAGTCATCTCAACAGGCTGAAGATGCTCTCTCCCAAGGAATGGATGCATTGCAGCAATCACTCTCTGAGACATTAGCTAATGGTTCACCCAATCCATCAAATTCTTCTGGAAATGTGGCAAATTACATGGGGCAAATGGCTATGGCTATGGGAAAGCTTGGTACTCTCGAGGGGTTTCTTCGCCAGGCTGATAATCTGCGGCAGCAAACGTTGCAACAAATGCTTCGAATATTAACAACTAGGCAATCAGCTCGAGCTCTTCTCGCAATAAGCGATTATTTCTCCCGGCTGCGAGCCCTGAGTTCTCTATGGCTTGCGCGGCCAAGAGAGTGA 1377 0.443 MGSRRRIVNVSSENTDKVVNGMPSYAPPLPPNSMGMEGTNIHPSRISEFGALEQSLGFRVEDAMNLSRNPVFNQMKSNSQALGADIQFGALSKSIANSDINLSAAIAGSQTLQLQRDSQPNLASTSGGHRENWGESNMADGSPDTSTDDTEDKNRMLERGDSSERSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSTGEQTHSMSGNGAMAFDVEYARWLEEHNRQTNELRAAINSHAGDIELRTIVDNFMTQFEDIYRLKGIAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVSHLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLSETLANGSPNPSNSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02031 458 MobiDBLite consensus disorder prediction 112 175 - -
Car03g02031 458 ProSiteProfiles DOG1 domain profile. 238 455 IPR025422 GO:0006351|GO:0043565
Car03g02031 458 CDD bZIP_HBP1b-like 173 225 - -
Car03g02031 458 Gene3D - 172 224 - -
Car03g02031 458 SUPERFAMILY Leucine zipper domain 173 216 IPR046347 GO:0003700|GO:0006355
Car03g02031 458 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 171 215 IPR004827 GO:0003700|GO:0006355
Car03g02031 458 Pfam Seed dormancy control 256 331 IPR025422 GO:0006351|GO:0043565
Car03g02031 458 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 176 191 IPR004827 GO:0003700|GO:0006355
Car03g02031 458 SMART brlzneu 169 232 IPR004827 GO:0003700|GO:0006355
Car03g02031 458 PANTHER TRANSCRIPTION FACTOR TGA9 60 458 - -
Car03g02031 458 MobiDBLite consensus disorder prediction 112 144 - -
Car03g02031 458 Pfam Basic region leucine zipper 169 215 IPR004827 GO:0003700|GO:0006355
Car03g02031 458 PANTHER TGACG-SEQUENCE-SPECIFIC DNA-BINDING PROTEIN TGA-2.1 60 458 - -
Car03g02031 458 MobiDBLite consensus disorder prediction 146 175 - -
Car03g02031 458 Coils Coil 192 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02031 Car-Chr3 66500632 66506198 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02031 138 458 bZIP Transcription Factor Family AT3G12250 74.018 1.77e-169 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car03g02031 DOG1 5.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02031 K14431 - gmx:778136 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02031 03 66500632 66506198 Car03g02031 03 66500632 66506198 ECH