Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02016 ATGGCGAAGCGATTGATTCCACTATTCAATCGTGTTTTGGTTGAGAAAATCGTCCCCCCATCAAAAACCAACGCTGGCATTTTGTTACCCGAGCAATCCTCAAAGCTGAATTCTGGGAAAGTTGTTGCTGTTGGCCCTGGCTTTCATGGTAAGGATGGGAAAATCGTTCCTGTGGCTGTGAAGGAAGGTGACACCGTTCTTTTGCCTGAATACGGGGGAACTGAGGTCAAGCTCAATGAAAAAGAGTACTATCTGTACAGAGATGACGATATATTGGGGACCTTGAATGATTGA 294 0.4524 MAKRLIPLFNRVLVEKIVPPSKTNAGILLPEQSSKLNSGKVVAVGPGFHGKDGKIVPVAVKEGDTVLLPEYGGTEVKLNEKEYYLYRDDDILGTLND 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02016 97 CDD cpn10 4 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Car03g02016 97 PANTHER GROES-LIKE FAMILY PROTEIN 1 97 - -
Car03g02016 97 Gene3D GroES chaperonin 1 97 IPR037124 GO:0006457
Car03g02016 97 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 97 IPR020818 GO:0005524|GO:0006457|GO:0140662
Car03g02016 97 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0140662
Car03g02016 97 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0140662
Car03g02016 97 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0140662
Car03g02016 97 PRINTS 10kDa chaperonin signature 82 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Car03g02016 97 SUPERFAMILY GroES-like 3 96 IPR011032 -
Car03g02016 97 Hamap Co-chaperonin GroES [groES]. 4 96 IPR020818 GO:0005524|GO:0006457|GO:0140662
Car03g02016 97 Pfam Chaperonin 10 Kd subunit 5 94 IPR020818 GO:0005524|GO:0006457|GO:0140662
Car03g02016 97 SMART Cpn10_2 4 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02016 Car-Chr3 66308626 66316219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02016 3 96 Calmodulin-binding Proteins AT5G20720 37.500 1.96e-11 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02016 K04078 - gmx:100306384 181.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02016 03 66308626 66316219 Car03g02016 03 66308626 66316219 ECH