Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02008 ATGGCTTCAAGACCCATTGTTCCTCAACAACAACAACCCAGAGGTGATGCTGCCCTGGGGGGAGGAAAACAGCATCAGAAGAAGAACGGTGTAGCCGGCGGCGATGGAAGGAACCGTGGAGCACTACGTGATATTGGAAATGTTGTCACTCTAAGAGGAGTTGAAGTCAAGCCAAATCGCCCAATCACAAGGAGTTTCTGTGCTCAACTACTTGCCAATGCTCAAGCAGCAGCTGTTAATGAAAACAACAAGAAACAGGCTTGTGCTAATGTGGCTCCTGCAAGACCTGTGGCTCCTGCAAGACCTGTGGCTCCTGCAAAACCTGCTCCTCCTGTTCTTGATGGAGTTGCAGTGGCTAGAAGAGTGGCCACAAAACCTGCTCAGAAGAAAGTCACTGCAAAACCAAAGCCGGTGGAAGTTATTGATATAAGTTCAGAAGAAAGTGCCAATGAAGAAGACAAGTCTGTGCACAAGAAAAAGGAAGTAGATGTCAATTCCAAGAAGAAATCACGCACTCTCACTTCTGTTCTCACAGCTAGAAGCAAGGCTGCATGTGGTTTGACTAACAAACCAAAGGAGATTGTTGACATTGATGCTGGTGATGCCAACAATGAGCTTGCTGCTGTTGAATACATTGAAGACATTTACAAGTTCTACAAGATAATTGAGAATGAGAGCCGTCCACATGACTACATGGACTCACAACCTGAGATAAACGAGAGGATGAGAGCTATACTTGTTGATTGGCTAGTAGATGTCCACACTAAGTTTGAACTTTCACCTGAAACCCTTTACCTAACTATCAACATTGTTGATAGGTTCCTAGCTATCAACCTTGTTTCAAGGAGAGAACTTCAATTGGTTGGCATCAGTGCCATGCTGATGGCATCAAAGTATGAAGAAATCTGGCCACCAGAGGTCAACGACTTTGTTTGCCTCTCAGATAGAGCTTACACTCATGAACAAATCCTCATGATGGAGAAAACCATCCTAGGGAAACTTGAATGGACGTTGACAGTGCCAACACCTTTTGTTTTCCTCGTTCGTTTCATCAAGGCGTCGGTGTCAGCTTCATTATCGGTTCCTTCGGAACAAGACGATGCTTTGGAGAACATGTCTCATTTTCTGTCTGAGTTGGGGATGATGCATTATGAGAGTTTGAGGTATTGTCCATCAATGGTTGCTGCATCAGCTGTGTTTGCAGCAAGGTGCACTTTGAACAAGGTTCCTGTTTGGAATGAGACACTTAAGGTGCACACTGGTTACTCAGAGGAACAATTGATGGATTGTGCTAGAATGTTGGTGAGTTTTCACTCTAGTGTTGGGAATGGAAAGCTGAAGGTTGTGTTTAAAAAGTACTCTGATCTTCAGAGAGGTGCTGTTGCTGTGATTCCACCTGCTAAGAATCTTGTGGCTGTTGTAGGTGGTGGTTCTTTCTAG 1440 0.4458 MASRPIVPQQQQPRGDAALGGGKQHQKKNGVAGGDGRNRGALRDIGNVVTLRGVEVKPNRPITRSFCAQLLANAQAAAVNENNKKQACANVAPARPVAPARPVAPAKPAPPVLDGVAVARRVATKPAQKKVTAKPKPVEVIDISSEESANEEDKSVHKKKEVDVNSKKKSRTLTSVLTARSKAACGLTNKPKEIVDIDAGDANNELAAVEYIEDIYKFYKIIENESRPHDYMDSQPEINERMRAILVDWLVDVHTKFELSPETLYLTINIVDRFLAINLVSRRELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYTHEQILMMEKTILGKLEWTLTVPTPFVFLVRFIKASVSASLSVPSEQDDALENMSHFLSELGMMHYESLRYCPSMVAASAVFAARCTLNKVPVWNETLKVHTGYSEEQLMDCARMLVSFHSSVGNGKLKVVFKKYSDLQRGAVAVIPPAKNLVAVVGGGSF 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02008 479 MobiDBLite consensus disorder prediction 1 40 - -
Car03g02008 479 ProSitePatterns Cyclins signature. 243 274 IPR006671 -
Car03g02008 479 Gene3D - 228 339 - -
Car03g02008 479 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 28 473 - -
Car03g02008 479 Pfam Cyclin, C-terminal domain 341 466 IPR004367 -
Car03g02008 479 SMART cyclin_7 248 332 IPR013763 -
Car03g02008 479 SMART cyclin_7 345 436 IPR013763 -
Car03g02008 479 CDD CYCLIN 339 435 IPR013763 -
Car03g02008 479 Pfam Cyclin, N-terminal domain 214 338 IPR006671 -
Car03g02008 479 MobiDBLite consensus disorder prediction 147 168 - -
Car03g02008 479 SMART Cyclin_C_2 341 467 IPR004367 -
Car03g02008 479 SUPERFAMILY Cyclin-like 342 469 IPR036915 -
Car03g02008 479 CDD CYCLIN 242 331 IPR013763 -
Car03g02008 479 SUPERFAMILY Cyclin-like 203 338 IPR036915 -
Car03g02008 479 MobiDBLite consensus disorder prediction 142 168 - -
Car03g02008 479 PANTHER CYCLINS 28 473 IPR039361 -
Car03g02008 479 PIRSF Cyclin_A_B_D_E 1 476 IPR039361 -
Car03g02008 479 Gene3D - 214 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02008 Car-Chr3 66196777 66199505 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02008 1 472 Core Cell Cycle Gene Families AT4G37490 51.125 3.96e-142 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02008 K21777 - mtr:MTR_7g089080 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02008 03 66196777 66199505 Car03g02008 03 66196777 66199505 ECH