Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02007 ATGCCTTCTTCAAGTTCAAAGCAtattagcagtagtagtagtagtagtactaAGAAGCAATCTAAATCAAAATCGAAGTTATCATCGCCGTTGATTAGCGATGCCGTCACTCCACCCCGCACTCCCGAACCGCACCAAATCGCCTCTCTCTTGCAAGAAGCTTCTCGAATCTTCCCATCCTTCATTTCAGAATCCGCTTTCCTTGGCCAAATCACCGATGTTGAATCCACCGATTCTCTTTCCAAAGCTTCTAAAATTTGGCTCTCTGAATCTTCTATGGTTGCCTCTTCCATTGCACCGGGTTCACTTGTCTCTGTGTCTATTCCATCTTCTTCAAGTCAAGGGATTGCACAATTGAATACCTTTCCTCTCACGTCATTGACTAATGAATGTGTCAAATGCTATGGATTGGAAACTTGTAACACATTGGATGGTGCTGCAGGAAACTATTTTGCTCTTGCAACTGTATTTCCTTCTAGGAAGGTTTTGAAGAATGGAGTACGCCTGTCTTTGAATCTTTCCTTTACCATGGGATGTCCTCCTTTGGGTATTAGTGTCTTTGTCCACCCATTACAGAAACAATACATATCTTGTCTTGCAAATGAGAGCAATGAACTGCATTCTGCAGGAAATAATTGTTCCTTGGTATATAATTGCAAGGAATTATATCTTCAGTTGGTTCCTTGTAACAGTGGACTACCATTGAAAGTTAATAATCTCCCCCCATTGGACTTGTCTAACTCAAAATCCCGTGTCCAATCTGAGAACAATTTTATTGCATCTCCTAAAACACCTTCTTATGGATCAAAGTTTTCTAATGGCAGTTTGTCTTCCCCCTCAGTATTTGAAGATTCAGCATCAAGTGTAACCAATAACAATGGTCAATCGGCGGCTTCATTTGATATTAGCAAGGCATTAGGAGATGAAAGTTCCAAAAAATTACTGCAGACATGTGCAAATTCATGGTTATACTCTCGTTGTTTACTGCTAGGGAATCTCATCAATGTCTCAATGTTTTCTGAGTTTTGCATTTTCCAAGTGAAAGGAATTAAAAAGGTGCCAGTTACCATACCTGACTATAGTCCATCGAATGGGAGCAGTAATTCAAATCTTGAGGATTCTGATATGGCGGAAAATGTGAATCTGGCTTTCACTGTCAATTGGGAAACAAAGGTATTTTTATCTTTGCCATCAAATGCAGCATTGTTAGAATCAATTCAAAGAGATTTATCGTGTCTGAAACTTGACCACAAGGCGACTAAACCTGGGATAAGTGATAATATTTCTAAATTAGGTGGTCTATCTAAAGAAGAACTGCTTTTAAAGAAGATAATTTATTCTTCAGTGAACAATACTTTATCAAGATTTGGTATACGGTCTACCAGAGGAGTCCTTCTTCATGGTCCACCCGGTACAGGAAAGACTTCCCTGGCTCAATTATGTGCTTATGACGCTGGGGTCAAATTTTTCCCTATAAATGGACCAGAAATTGTTTCACAGTATTATGGGGAAAGTGAGCAAGCATTGCATGAAATTTTTGAATCGGCCATTCAAGCTGCACCTGCCGTGATATTCATTGATGAAGTAGATGCAATTGCCCCTGCAAGGAAAAATGGAAGTGAAGAGCTATCTAAAAGATTGGTTGCGACCTTATTGAATCTGATGGATGGAATTAGTAGGAATGAAGGGTTACTTGTAATTGCTGCCACTAATAGGCTTGACCATATTGAACCAGCTCTCAGACGACCGGGGAGATTCGACAAGGAAATTGAAATTGGTGTGCCAGCCCCCGCACAGCGAGATGATATTTTGCGCACTCTTCTCCGTGAAACAGATCACTGTCTTTCTGAGTCACAAATTGAAGAGCTTGCCTCAATAACTCATGGATTTGTAGCTGCTGATTTAGTTGGCCTTTGCAGTATGGCAACCTTTATTTGTCTACGACGTTATGCTAAACATAAACTTAATAAGACTTGCAATGCTAGTTCTGATATGAATACGGCATCAAATTCGAGAGATCATTCAGAAATGATGCTTGTTAGCAGTGACAAGGAGCATATTTTGAAAGTGACTTTTGAGGATTTTCAGAAGGCTAAGCTTGAAATAAGACCGAGTGCCATGAGAGAGGTGAATCTCGAGGTTCCAAAGGTTCATTGGGGAGATGTGGGCGGCCAAAAGGAGGTCAAAGATCAATTGTTGGAAGCAGTAGTATGGCCTCAAAAGCACCGTGATGCATTCACACGTATTGGGAATAACCCTCCAAAAGGTATATTGATGTTTGGGCCTCCAGGTTGTAGCAAAACCCTCATGGCACGTGCAGTTGCTTCTGAAGCAGGATTGAACTTTCTAGCAGTCAAGGGTCCTGAACTCTTCAGCAAATGGGTTGGTGAATCTGAGAAGGCTGTCAGATCATTGTTTGCAAAAGCAAGGGCCAATGCCCCATCAATTGTATTTTTCGATGAAATAGATAGTCTTGCTGTAACTCGTGGGAAGGAAAGTGATGGTGTTTCCGTGTCAGATAGGGTCATGAGCCAGCTTCTTGTTGAATTGGATGGTTTGCAAGAAAGAGTTGATGTTACTGTCATAGCTGCTACAAATAGACCAGACAAGATTGACCCTGCTCTTTTAAGACCAGGACGCTTTGACCGCCTGCTATATGTTGGACCTCCTAATGAGATGGATAGAGAAGAGATATTTAGCATTCATTTGCGTAAAATTCCTCATGATTCTGATGTTAACATTAAAGAACTGGCTCAAATGACTGATGGTTATACTGGGGCCGATATATCACTTATATGTCGACAATCAGCTTTTGCAGCAATGGAGGAAAGCTTTGACGCTTCTGTTGTAACAATGAAGCACTTAAAGATGGCAATTGAACAGGTTCAGCCCTCAGAATATCAGTCGTACCAAAAGCTGTCAGCAAAATTTCAAAGGGTCGTCTTCTCTGCTGTGATATAA 2961 0.4056 MPSSSSKHISSSSSSSTKKQSKSKSKLSSPLISDAVTPPRTPEPHQIASLLQEASRIFPSFISESAFLGQITDVESTDSLSKASKIWLSESSMVASSIAPGSLVSVSIPSSSSQGIAQLNTFPLTSLTNECVKCYGLETCNTLDGAAGNYFALATVFPSRKVLKNGVRLSLNLSFTMGCPPLGISVFVHPLQKQYISCLANESNELHSAGNNCSLVYNCKELYLQLVPCNSGLPLKVNNLPPLDLSNSKSRVQSENNFIASPKTPSYGSKFSNGSLSSPSVFEDSASSVTNNNGQSAASFDISKALGDESSKKLLQTCANSWLYSRCLLLGNLINVSMFSEFCIFQVKGIKKVPVTIPDYSPSNGSSNSNLEDSDMAENVNLAFTVNWETKVFLSLPSNAALLESIQRDLSCLKLDHKATKPGISDNISKLGGLSKEELLLKKIIYSSVNNTLSRFGIRSTRGVLLHGPPGTGKTSLAQLCAYDAGVKFFPINGPEIVSQYYGESEQALHEIFESAIQAAPAVIFIDEVDAIAPARKNGSEELSKRLVATLLNLMDGISRNEGLLVIAATNRLDHIEPALRRPGRFDKEIEIGVPAPAQRDDILRTLLRETDHCLSESQIEELASITHGFVAADLVGLCSMATFICLRRYAKHKLNKTCNASSDMNTASNSRDHSEMMLVSSDKEHILKVTFEDFQKAKLEIRPSAMREVNLEVPKVHWGDVGGQKEVKDQLLEAVVWPQKHRDAFTRIGNNPPKGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIVFFDEIDSLAVTRGKESDGVSVSDRVMSQLLVELDGLQERVDVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNEMDREEIFSIHLRKIPHDSDVNIKELAQMTDGYTGADISLICRQSAFAAMEESFDASVVTMKHLKMAIEQVQPSEYQSYQKLSAKFQRVVFSAVI 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02007 986 MobiDBLite consensus disorder prediction 1 35 - -
Car03g02007 986 Pfam AAA+ lid domain 620 653 IPR041569 -
Car03g02007 986 Pfam AAA+ lid domain 911 956 IPR041569 -
Car03g02007 986 Gene3D - 714 965 IPR027417 -
Car03g02007 986 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 715 968 IPR027417 -
Car03g02007 986 CDD AAA 459 593 - -
Car03g02007 986 Gene3D - 594 713 - -
Car03g02007 986 PANTHER - 65 664 - -
Car03g02007 986 PANTHER - 676 982 - -
Car03g02007 986 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 431 699 IPR027417 -
Car03g02007 986 Gene3D - 413 593 IPR027417 -
Car03g02007 986 Gene3D - 890 960 - -
Car03g02007 986 SMART AAA_5 460 596 IPR003593 -
Car03g02007 986 SMART AAA_5 753 891 IPR003593 -
Car03g02007 986 Pfam ATPase family associated with various cellular activities (AAA) 757 888 IPR003959 GO:0005524|GO:0016887
Car03g02007 986 Pfam ATPase family associated with various cellular activities (AAA) 464 593 IPR003959 GO:0005524|GO:0016887
Car03g02007 986 CDD AAA 723 889 - -
Car03g02007 986 MobiDBLite consensus disorder prediction 1 44 - -
Car03g02007 986 PANTHER AAA-FAMILY ATPASE 65 664 - -
Car03g02007 986 PANTHER AAA-FAMILY ATPASE 676 982 - -
Car03g02007 986 ProSitePatterns AAA-protein family signature. 859 877 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02007 Car-Chr3 66184549 66195498 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02007 16 983 Calmodulin-binding Proteins AT3G56690 52.713 0.0 952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02007 03 66184549 66195498 Car03g02007 03 66184549 66195498 ECH