Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02006 ATGAGAGAAGAAGAATCAAATCGGTTTTCAAGATGGGAAGAACAACTCCCTCCACCAGAAGAACTCCCTCTACCGGAAGAACTCATGCCTTTATCACAAACCCTAATCACCCCTGATCTTGCCATAGCTTTCGATATCAGAAACCCacacaccacaatcaacaacaataacccacaccatcatcatcaacaacatcaccaacaacCTCCTCCACCTTCTTCACTTCCTTCTTCAACCGATTTCGCCGATTCCGGTGAACTCGGTTCCGGCACTGCCGGAGAAGAACCAGCTAGAACACTCAAAAGACCAAGACTCGTCTGGACCCCACAACTCCACAAACGCTTCGTCGACGCCGTCGCACACCTCGGTATCAAAAACGCCGTTCCCAAGACCATAATGCAGCTCATGAGTGTCGACGGTTTAACAAGAGAAAACGTCGCTAGTCACTTGCAAAAATATCGACTTTATCTTAAACGCATGCAGGGAATTCCCTCCGCCGGTGGCGGTGGTTCCGGTGGTGGCTCCGCCTCCGTTAACGACCCTGCGACCGATCACTTATTCGCTAGCTCGCCTGTGCCGCCGCACTTTCTTCACCCCGTTGCTCGGCCGAATTCGGATCATTTTATGCCTTTTGTTCCTGTTCCTGCCATTCACCATCAGCAGCAGTTGGCTGCTGCTCAGTATCATCGGCCGGTCGGGCATTTCGGTTCGCCGCCGAATGGACACTTTGAGAATCCCTTtttgtctagacagcagcaacatcaacaccaacatcagcagcagcagcagcttcatagGATTGGGGCACAAGTGCATAACCCTATTGGTGGTTATGTGGAGGATATGGAATCAGCTAATGCTTCAGGAGGGAGAAAGGTTCTTACTTTGTTTCCAACCGGAGATGATTGA 909 0.4455 MREEESNRFSRWEEQLPPPEELPLPEELMPLSQTLITPDLAIAFDIRNPHTTINNNNPHHHHQQHHQQPPPPSSLPSSTDFADSGELGSGTAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGIPSAGGGGSGGGSASVNDPATDHLFASSPVPPHFLHPVARPNSDHFMPFVPVPAIHHQQQLAAAQYHRPVGHFGSPPNGHFENPFLSRQQQHQHQHQQQQQLHRIGAQVHNPIGGYVEDMESANASGGRKVLTLFPTGDD 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02006 302 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 302 IPR044841 GO:0003700|GO:0006355
Car03g02006 302 MobiDBLite consensus disorder prediction 49 101 - -
Car03g02006 302 MobiDBLite consensus disorder prediction 1 15 - -
Car03g02006 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 158 IPR017930 -
Car03g02006 302 Gene3D - 99 161 - -
Car03g02006 302 MobiDBLite consensus disorder prediction 1 27 - -
Car03g02006 302 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 103 155 IPR006447 GO:0003677
Car03g02006 302 SUPERFAMILY Homeodomain-like 99 159 IPR009057 -
Car03g02006 302 MobiDBLite consensus disorder prediction 241 266 - -
Car03g02006 302 Pfam Myb-like DNA-binding domain 106 154 IPR001005 -
Car03g02006 302 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 1 302 - -
Car03g02006 302 MobiDBLite consensus disorder prediction 244 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02006 Car-Chr3 66175725 66177857 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02006 1 302 G2-like Transcription Factor Family AT3G10760 55.211 1.25e-95 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car03g02006 Myb_DNA-binding 2.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02006 - - ccaj:109802866 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02006 03 66175725 66177857 Car03g02006 03 66175725 66177857 ECH