Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01997 ATGGAAGGAAATAGTGCAAGTTTTTTTCAAAGGTGCAAGCCTTACATAGCTATGATTTCTCTACAATTTGGATTTGCTGGTATGAACATAATAACAAAAGTTTCACTCAACCGTGGAATGAGTCACTATGTTCTTGTTGTTTATAGACATGCTTTTGCTACTGCTGCTATTGCTCCATTTGCTATAGTTCTTGAGAGGAAGATTAGGCCCAAGATTTCATTTCTTATGTTCATGCAAATGTTCGTCTTGGGACTTCTCGGGCCTGTGATTGATCAGAATCTATACTATGCTGGGCTGAAATTCACTTCCCCAACCTACTCATGTGCTATTAGCAACATTCTCCCTGCAATGACATTTGTAATGGCAGTGCTCTTCAGGATGGAGAAATTGGACATAAGAAAATTAAGATGCCAAGTAAAGGTGATTGGAACTGTAATCACAGTTGCTGGGGCCATGCTGATGACATTATACAAAGGAGAAGTTATTAATATATTGGGGTCTCAATATATGCATCATCCTAAAAATTATTCACCTGAAAACAACACTGATTCTGGTGAAAAGGATTGGTTTAAGGGTTCTATTCTGCTACTTATAGCTACCTTTGCTTGGGCTTCTTTCTTCATCCTTCAGGCAGTGACATTAAGAAAATACTCAGCTCAGCTCTCACTGACAGCCATAGTGTGTTTCTTAGGCACACTTCAATCAATTGCAGTTACCTATGTTATGGAGCACAGGCCATCTGTTTGGAACATTGGTTGGGACATGAACCTATTAGCTGCAGCCTATGCAGGTATAATATCATCAGGTCTTACCTACTATGTTCAAGGGATAGTGATGCAAAAGAAAGGGCCAGTTTTTGTCACTGCTTTTAGTCCTTTGATGATGATCATTGTAGCCATCATGGGAACTTTCATCCTTGCAGAAAAATTATATCTTGGAGGAATTATTGGAGCTACTTTGATAGTAATAGGACTTTACTCAGTTCTATGGGGAaaaagcaaagaaaacaaagaaattgaagaagagataagaacagaGGGAGTGGAGTGTTGTAGAGAAAATGGAGTGATGGAAACAGTGGTTGAAGAAGGAGTTGAAGTAAATGACATTGAAATGCAAAATGGTGAAGCTATTAAAGAGTTAAGGGTAGTAGCAATTATTACTGCTCCAAAAGTTTAA 1179 0.3723 MEGNSASFFQRCKPYIAMISLQFGFAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFAIVLERKIRPKISFLMFMQMFVLGLLGPVIDQNLYYAGLKFTSPTYSCAISNILPAMTFVMAVLFRMEKLDIRKLRCQVKVIGTVITVAGAMLMTLYKGEVINILGSQYMHHPKNYSPENNTDSGEKDWFKGSILLLIATFAWASFFILQAVTLRKYSAQLSLTAIVCFLGTLQSIAVTYVMEHRPSVWNIGWDMNLLAAAYAGIISSGLTYYVQGIVMQKKGPVFVTAFSPLMMIIVAIMGTFILAEKLYLGGIIGATLIVIGLYSVLWGKSKENKEIEEEIRTEGVECCRENGVMETVVEEGVEVNDIEMQNGEAIKELRVVAIITAPKV 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01997 392 Pfam EamA-like transporter family 15 155 IPR000620 GO:0016020|GO:0016021
Car03g01997 392 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020|GO:0016021
Car03g01997 392 PANTHER WAT1-RELATED PROTEIN 9 365 - -
Car03g01997 392 PANTHER WAT1-RELATED PROTEIN 9 365 IPR030184 GO:0016021|GO:0022857
Car03g01997 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 334 - -
Car03g01997 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01997 Car-Chr3 66034792 66037464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01997 7 390 Nodulin-like Gene Family AT5G07050 61.183 4.08e-173 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01997 - - gmx:100793545 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01997 03 66034792 66037464 Car03g01997 03 66034792 66037464 ECH