Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01993 ATGTCAAGCACTAATCAAGATCCAAACAAGGAGAATGAGAAAGTGAATGAAGATCAATCCCAAAACAATGAGAATGAAACTGCGATGATCGTGGTCGAGGAACCACGAGCTAATCAAAATCAAGAGATTGTTGTTGTTGACGAGGAATCAATAAATTCCTCGAAAGAAATTTCACCAATTCTCCTGTTTGGATACATAGTTGATCCAAGCAGGGGAATTCAGCAAGGTTACTCATGCAACTTTTGCAGCAGAGTTTTCCTTAACCCACAAGCATTAGGTGGCCATCAAAATTGCCACAAATGGGAGAGAAATCTGAAAAAGAGAATCCTTGCTATGAACAGAGCTTGGAAAAGAAACATTAAGAAAGGGGTTAACTTTAATAACTCCATTAAACAACCATACTTTCAAAGGTATGGTGGTGGACATCATCAATATTATGGATTTAACAGACTGAATATTCAGCATGCTGCTGCTTCTGTTGGGTCATCATCATCAAATGCAGGGATTTTTCATGGTGCAGCTGCAATGATGCAGCAGCATCAAAATTTGGCATGGTTCAATAATCATCATGGAAATGGAATCAAAGAGGGTGGTAATGAAGGTGGAAAATCAGGAATTAACTTTGTTAATTTTCTGTCAGTGACAGGAAGAAGACAACAAGCTACTATTAGGACTGAGGTTGACATTAATTTGGTTCCAAAGGGTGGTGCTGGTAGGGATGCTGCTGCTGATGAAGACAAAGAGATTTAA 750 0.3893 MSSTNQDPNKENEKVNEDQSQNNENETAMIVVEEPRANQNQEIVVVDEESINSSKEISPILLFGYIVDPSRGIQQGYSCNFCSRVFLNPQALGGHQNCHKWERNLKKRILAMNRAWKRNIKKGVNFNNSIKQPYFQRYGGGHHQYYGFNRLNIQHAAASVGSSSSNAGIFHGAAAMMQQHQNLAWFNNHHGNGIKEGGNEGGKSGINFVNFLSVTGRRQQATIRTEVDINLVPKGGAGRDAAADEDKEI 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01993 249 MobiDBLite consensus disorder prediction 1 27 - -
Car03g01993 249 PANTHER EXPRESSED PROTEIN 12 130 - -
Car03g01993 249 SUPERFAMILY beta-beta-alpha zinc fingers 76 105 IPR036236 -
Car03g01993 249 ProSitePatterns Zinc finger C2H2 type domain signature. 79 99 IPR013087 -
Car03g01993 249 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 104 IPR013087 -
Car03g01993 249 PANTHER ZINC FINGER PROTEIN JAGGED 12 130 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01993 Car-Chr3 66007049 66007831 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01993 77 147 C2H2 Transcription Factor Family AT1G24625 35.632 4.74e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01993 - - mtr:MTR_7g022250 130.183