Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01990 ATGTTGAGCACTAATGGGAAAGGGAAAATGAGTGAAGAATCTGAAACCAAAGTGGGGAATAAAAAGAAACGTTACTCATGTGTGTTTTGTGAAAGAACATTTGATACTCGACAAGCACTAGGAGGACACCAACGTGGTCACAAACGTGAGAGAAATGTCATAAAATTGGTGAAGCCTCGTCGTCCAAGGACAAATCTTACTTTTACTAACATCGACTTGTTGTTCAATTCTAGTAATTTTAATATTAACAACAACAATTCTAGTTTGAATCCAAATATCATAAATGAAATCAAAGAGGGTCATCGACCAAAATCTGAATTTGAGTTTGTTTTGCTTCCAAGAGGGAGTCAACATGTTATTAGAACTGAGATTGACTTTGGTTTGGTTTCAAAGGGAGGTGCTAATAGTCATAATTATGACTTATGGAGTGGTTCGAGTTCAAATTCAGAAGAAAAATAA 459 0.3529 MLSTNGKGKMSEESETKVGNKKKRYSCVFCERTFDTRQALGGHQRGHKRERNVIKLVKPRRPRTNLTFTNIDLLFNSSNFNINNNNSSLNPNIINEIKEGHRPKSEFEFVLLPRGSQHVIRTEIDFGLVSKGGANSHNYDLWSGSSSNSEEK 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01990 152 ProSitePatterns Zinc finger C2H2 type domain signature. 27 47 IPR013087 -
Car03g01990 152 SUPERFAMILY beta-beta-alpha zinc fingers 21 52 IPR036236 -
Car03g01990 152 Gene3D Classic Zinc Finger 5 72 - -
Car03g01990 152 PANTHER ZINC FINGER PROTEIN JAGGED 11 87 IPR045320 GO:0003700
Car03g01990 152 ProSiteProfiles Zinc finger C2H2 type domain profile. 25 52 IPR013087 -
Car03g01990 152 PANTHER ZINC FINGER PROTEIN KNUCKLES 11 87 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01990 15 55 C2H2 Transcription Factor Family AT5G25160 51.220 1.21e-09 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car03g01990 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01990 - - cam:101490690 283.493