Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01989 ATGTCTGACAGAATCTCCATTGGAAATGTTGAGGACAGAAAGCTCAAACGCAAGATGGAGATAGAGTCGGAGCCAAGTTCAACACCAACATCTGAATCCAAGGGTGTGGATTTAGAAGATTTACTAACTTTGAGACTTGGTGGAATTCACGACAAGCCTATTTCCAAATTCATGAAGAATTCGGGAGATTCGAGTTCATCGACTCAGAAAGTTTCTGGTGAACCTTTATTTTCAAGTTCATCAACTCAAAAAGCTTCTGGTGAACCTTTGTTTGAGTCAGAAGTGAAGGAATTTCCTTGTCACTATTGTAACAAAAAATTCCCCACTTCTCAAGCTCTTGGGGGACACCAAAATGCTCACAAACGTGAGCGCGTGTTCACAAAATTGGAACGAAAAAGGAGAGAGGATGAGATTGATGCAGCCCTAAGGTATAGATCTAATGTATACACTTACCCATTTCCAAGTCCTATTCCCTATCATCAAGGGTTACCTTATTACCGTAGCCATATCAACAATCCCATGCCTTCTTGGCCTATTGGTTCTCCTAGTGGCGGTTATGGAGGAGTGTATATGTCCAATACACCCCCTACAACACCACAATTTGGGATGCAAATGTCAAATCCATCCCTTGGAACATCACAATTTGGGACAAATAATTATTGGAGTGGAGGTCATGGTGCTACTTTACCAATTCAACAAAGGTCAAACCCTTTGGATATAGGACATTATACTCGATCTATTAATCAAACATCTCCTTCGGTTGTTGAGGGTGTACACAGAAATTTTAATGGTAATTTTCGTTCTCAAACTCTTTCTTTATTATCTCGTGCTACTATTAGTGAAGGTCTTGTTCAAACAAATTCCAATGTGTCTTCGTCAAAGCAATCAACCTCGGATCAACTCGACTTGAAACTTAGTCTTTAA 924 0.3994 MSDRISIGNVEDRKLKRKMEIESEPSSTPTSESKGVDLEDLLTLRLGGIHDKPISKFMKNSGDSSSSTQKVSGEPLFSSSSTQKASGEPLFESEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTKLERKRREDEIDAALRYRSNVYTYPFPSPIPYHQGLPYYRSHINNPMPSWPIGSPSGGYGGVYMSNTPPTTPQFGMQMSNPSLGTSQFGTNNYWSGGHGATLPIQQRSNPLDIGHYTRSINQTSPSVVEGVHRNFNGNFRSQTLSLLSRATISEGLVQTNSNVSSSKQSTSDQLDLKLSL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01989 307 ProSitePatterns Zinc finger C2H2 type domain signature. 100 120 IPR013087 -
Car03g01989 307 PANTHER ZINC FINGER PROTEIN JAGGED 61 307 IPR045320 GO:0003700
Car03g01989 307 ProSiteProfiles Zinc finger C2H2 type domain profile. 98 125 IPR013087 -
Car03g01989 307 MobiDBLite consensus disorder prediction 1 36 - -
Car03g01989 307 Pfam C2H2-type zinc finger 98 122 - -
Car03g01989 307 MobiDBLite consensus disorder prediction 53 88 - -
Car03g01989 307 Gene3D Classic Zinc Finger 77 148 - -
Car03g01989 307 MobiDBLite consensus disorder prediction 1 23 - -
Car03g01989 307 MobiDBLite consensus disorder prediction 286 307 - -
Car03g01989 307 MobiDBLite consensus disorder prediction 58 88 - -
Car03g01989 307 SUPERFAMILY beta-beta-alpha zinc fingers 96 127 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01989 Car-Chr3 65967055 65967978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01989 92 128 C2H2 Transcription Factor Family AT5G06650 70.270 1.10e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car03g01989 zf-C2H2_6 7.1e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01989 - - cam:101490368 603.594