Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01977 ATGGAGGAACGACAGCCCGAACTAGAACAACAGCGCCAGGTCAGCACTATCGGAACTAATAATCGTCTTCTCTGTGCCTCCCGATCGGAGGATGACGACGATGACGGCGGATGCGCCTATTCAAGGGCGGTGTTGGTGGTCGACATGGTCTGGAACATGTCGTTCGTGGTGGTTGCCGCCGCCGTCATCCTTTCCACTTTCGGCGAGCGTCCCTCCACTCCTCTGAGGTTTTGGTTATGTGGTTATGCGTTGGAGTGCATTCTCCACGTGGTTTTTGTTTACTCTGAATATCGCTCCATTTATCGTAATTCATTCTCTCACACTCCTTACAGCACTGCGAAGAAATTAGAGCCTATGAACACTCTGGCATCCTCTGTTTGGTGGGTGTTTGGATTTTATTGGATTGTTGTTGGAGGCCAAGCGCTTCTGGAAGATTCTCCTCGTCTATACTGGTTAACAGTGGTCTTTCTAGCCTTTGACGTATTTTTTATTATCTTTTGCATTGGGATGGCATGTATAGTTTTCTTTGCTCTCTTCTGCATCATTCCGATAATAGCGCTAGCTTATGCTTTTAGAATCAGAGAAGGTGCTTCAGAAGATGATATCAGGTCACTTCCTATGTATAGATTTAGTCATTCAAATGTAATGGTTATGGTTGATGACAACAAGAAGAAACTTGTCAAAACAAGAACCGATTCGTACAATCAAAGCCATTTTAGTGAAGTATCTCTTCATCCAGATGATTCTGAATGCTGTATCTGCCTATGCACATATGTTGATGGAACAGAACTGTATCGCCTTCCCTGTACCCACCATTTTCATTGTGGATGCATCAGTCGCTGGCTTCGGACAAAAGCAACTTGCCCACTCTGCAAATTTAATATCCGAAGAGGAGGCGATACATTGGTCTGA 912 0.4485 MEERQPELEQQRQVSTIGTNNRLLCASRSEDDDDDGGCAYSRAVLVVDMVWNMSFVVVAAAVILSTFGERPSTPLRFWLCGYALECILHVVFVYSEYRSIYRNSFSHTPYSTAKKLEPMNTLASSVWWVFGFYWIVVGGQALLEDSPRLYWLTVVFLAFDVFFIIFCIGMACIVFFALFCIIPIIALAYAFRIREGASEDDIRSLPMYRFSHSNVMVMVDDNKKKLVKTRTDSYNQSHFSEVSLHPDDSECCICLCTYVDGTELYRLPCTHHFHCGCISRWLRTKATCPLCKFNIRRGGDTLV 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01977 303 SUPERFAMILY RING/U-box 236 296 - -
Car03g01977 303 SMART ring_2 251 291 IPR001841 -
Car03g01977 303 ProSiteProfiles Zinc finger RING-type profile. 251 292 IPR001841 -
Car03g01977 303 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 223 299 IPR013083 -
Car03g01977 303 Pfam Ring finger domain 250 292 IPR001841 -
Car03g01977 303 CDD RING-H2_RNF111_like 250 294 - -
Car03g01977 303 PANTHER RING-FINGER UBIQUITIN LIGASE 13 302 - -
Car03g01977 303 PANTHER TARGET OF ERK KINASE MPK-1 13 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01977 Car-Chr3 65816511 65820811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01977 22 300 C3H Transcription Factor Family AT1G68070 44.667 2.85e-86 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01977 - - gmx:100808066 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01977 03 65816511 65820811 Car03g01977 03 65816511 65820811 ECH