Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01972 ATGGAACATAATTTGGGTCAAGAACCTGCATCAGGTTCCTTTGATAAGTCTAGGGTTTTAAATGTTAAGCCGTTGAGGACTCTTGTTCCCGTGTTCCCTTCACCGTCTAATCTATCTTCATCTTCAACTCCCCAAGGTGGTGCTCCTTTTGTTTGTGCTTCCCCTTCTGGTCCTTTCCCATCTGGAGTTGCACCCTTTTACCCTTTCTTTGTGTCACCCGAATCTCAGAGGCTTTCTGAACAAAATGCACCAAACCCAACCCCTCAACGTGCCACACCAATTTCTGCTGCTGTTCCGATTAATTCGTTTAGGACACCAACCGGGACGACAAATGGAGATGTGGGCGGTTCGTCCCGCAGGAATAGCCGGACGCGTAGTGGACAGCTCATTGAGGAAGAAGTTGATGAAATTGATGTAGAAGATGGAACTGGAGATGGGGGTTCAAAGCACAAGAAGAGGGGAAGAAAACGACGtgctagcggtgttggtaccagtagtggtttggttgttgttgatgttgatctagatgtagtggctaacgaaattctccaatcaattaatcccatggtTTTTGATGTAATAAATCATCCTGATGGTAGCAAGGACTCTGTGACATATACACTTATGATATATGAAGTGTTGCGAAGAAAGCTTGGACAAATTGAAGAGTCAACAAAAGATGCTCATACTGGAGCAAAGCGGCCTGATTTGAAGGCAGGAACAGTTATGATGAGTAAAGGGGTTAGGAGTAACAGCAAGAAAAGGATTGGAGTTGTGCCTGGTGTTGAGATTGGGGATATTTTCTTCTTCCGATTTGAAATGTGCTTAGTGGGACTACATTCACCTTCTATGGCAGGAATCGATTACCTGGGTTCCAAAGCAAGTCAAGAGGAAGAGCCATTAGCTGTTAGTATTGTCTCATCTGGAGGATATGAAGATAATACAGACGACGGGGATGTGTTGATCTACAGTGGCCAAGGTGGAGTTAATCGTGACAAGGGAGCAAGTGATCAAAAGCTTGAAAGGGGTAATCTTGCTTTGGAGAAGAGCATGCATAGAGGTAATGATGTGAGAGTTATTAGGGGTTTGAAAGATGTAATGCATCCAACTGGGAAGGTATACGTCTATGACGGTATTTACAAGATTCAGGATTCATGGGTGGAGAAAGCAAAGTCTGGTTTCAATGTATTTAAGTATAAATTAGTAAGGAGTCCCGGGCAGGCTGATGCATATGTGATATGGAAAAACATTCAACAATGGACCGATAAGTCAGCTTCAAGAACAGGGGTTATATTGCCCGATCTTACTTCCGGGGCTGAAAAAGTACCTGTTTGTCTTGTGAACGATGTTGATAACGAGAAAGGCCCTGCATATTTCACTTACAGCCCTACTCTCAAGAATTTGAAGGCAGTTGCTCCTGTGGAATCTTCCGCTGGATGTTCTTGTGTTAGTGGATGTCAAGCTGGCAATTATAACTGTCCATGCATTCAAAATAATGGAGGTCATCTCCCGTATTCTGCAGCTGGGTTACTTGCGGACCTAAAATCTGTGGTACATGAGTGTGGTCCTTCCTGTCAGTGTCCCCCTACTTGCCGAAACCGTGTTTCCCAAGTTGGCATGAAATTTCGTTTGGAGGTTTTCAGAACCAAGAATAAAGGTTGGGGTCTAAGATCATGGGACGCTATTCGTGCTGGAACTTTTATATGCGAGTATGCAGGGGAAGTCATAGATAATGCTAGAGCTGAGATACTTGGCAGTGAAAACGAAGACGAGTACATTTTTGATTCTACACGCATTTATCAGCAGCTGGAAGTTTTTCCTGGTGACAATGAAGCTCCAAAGATCCCATCCCCGCTTTATATAACAGCAAAAAATGAAGGGAATGTTGCTCGGTTTATGAATCACAGCTGCTCTCCTAATGTACTGTGGCGTCCGGTTGGGATACTTTTGTTAATTGTACTCAAGTATAAGCTCTAG 1977 0.4173 MEHNLGQEPASGSFDKSRVLNVKPLRTLVPVFPSPSNLSSSSTPQGGAPFVCASPSGPFPSGVAPFYPFFVSPESQRLSEQNAPNPTPQRATPISAAVPINSFRTPTGTTNGDVGGSSRRNSRTRSGQLIEEEVDEIDVEDGTGDGGSKHKKRGRKRRASGVGTSSGLVVVDVDLDVVANEILQSINPMVFDVINHPDGSKDSVTYTLMIYEVLRRKLGQIEESTKDAHTGAKRPDLKAGTVMMSKGVRSNSKKRIGVVPGVEIGDIFFFRFEMCLVGLHSPSMAGIDYLGSKASQEEEPLAVSIVSSGGYEDNTDDGDVLIYSGQGGVNRDKGASDQKLERGNLALEKSMHRGNDVRVIRGLKDVMHPTGKVYVYDGIYKIQDSWVEKAKSGFNVFKYKLVRSPGQADAYVIWKNIQQWTDKSASRTGVILPDLTSGAEKVPVCLVNDVDNEKGPAYFTYSPTLKNLKAVAPVESSAGCSCVSGCQAGNYNCPCIQNNGGHLPYSAAGLLADLKSVVHECGPSCQCPPTCRNRVSQVGMKFRLEVFRTKNKGWGLRSWDAIRAGTFICEYAGEVIDNARAEILGSENEDEYIFDSTRIYQQLEVFPGDNEAPKIPSPLYITAKNEGNVARFMNHSCSPNVLWRPVGILLLIVLKYKL 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01972 658 SMART G9a_1 252 407 IPR003105 -
Car03g01972 658 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 20 646 IPR025794 GO:0016571
Car03g01972 658 MobiDBLite consensus disorder prediction 75 162 - -
Car03g01972 658 Pfam Pre-SET motif 436 534 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Car03g01972 658 SMART preset_2 432 526 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Car03g01972 658 ProSiteProfiles SET domain profile. 542 658 IPR001214 GO:0005515
Car03g01972 658 ProSiteProfiles Pre-SET domain profile. 478 539 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Car03g01972 658 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 10 646 - -
Car03g01972 658 SUPERFAMILY PUA domain-like 239 421 IPR015947 -
Car03g01972 658 Pfam SET domain 553 645 IPR001214 GO:0005515
Car03g01972 658 ProSiteProfiles YDG domain profile. 257 403 IPR003105 -
Car03g01972 658 Pfam SAD/SRA domain 256 407 IPR003105 -
Car03g01972 658 Gene3D SET domain 412 648 IPR046341 -
Car03g01972 658 SUPERFAMILY SET domain 418 646 IPR046341 -
Car03g01972 658 SMART set_7 542 658 IPR001214 GO:0005515
Car03g01972 658 MobiDBLite consensus disorder prediction 75 124 - -
Car03g01972 658 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 10 646 - -
Car03g01972 658 Gene3D - 255 411 IPR036987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01972 Car-Chr3 65774961 65778445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01972 9 646 Su(var)3-9 homologs AT1G73100 46.697 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Car03g01972 SAD_SRA 2.6e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01972 K24405 - gmx:100805932 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01972 03 65774961 65778445 Car03g01972 03 65774961 65778445 ECH