Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01968 ATGGAACGAAGTAAATTGATTATTGTATCAGATTTTGTTATGTCTTTCATGTGGGTATGCTCTGGTGTTCTCGTTCGATTATTCGTCTTCAAAGTTCTTGCCTTTTCTCATACCCATATCGCTGAGATTGTCAAAATTGTTTTTTCCATAGCCAACATGTTCCTCTTTGCTTTCCTTGCTAAGGTTTCTCGTGGTGGGGCCTACAATCCTCTCACTGTTTTGGCTGATGCTTTCTCTGGAGATTTTCATAACTTCATTTTTTGTGTTGGTTCCAGAATTCCTGCTCAGGTGGTTGGATCTATTGTTGGTGTAAAATTTCTTATTGATACCATTCCCGAAGTAGGACGGGGACCGCGTTTGAATGTTGACATTCATCGGGGAGCATTGACAGAAGGATTACTAACATATGCAATTGTAACCATTTCACTTGGACTTGCCGCAACAAAAATCCATGGAAGTTTCTTCATGAAGACTTGGATTTCCAGCCTCTCCAAGTTAACACTTCATATACTTGGTTCTGATCTTACCGGTGGTTGTATGAACCCCGCAGCTGTAATGGGATGGGCTTATGCTCGAGGCGATCACATAACAAAGGAGCACATTCTTGTATACTGGCTTGCCCCCATAGAGGCAACTATTTTGGCAGTGTGGACATTTAAATTGCTCGTACGACCCGTAAAAGAAGATAAAACAGGCTCAAAAAGTGTTTATGGAATTGTCAAGAACATTCACATGCTTGTATTATTCTGCAAGAACGATGGAATTGCTTTCTGGAGCTTTTTCAACACTGTTGCTCGCTAG 801 0.4107 MERSKLIIVSDFVMSFMWVCSGVLVRLFVFKVLAFSHTHIAEIVKIVFSIANMFLFAFLAKVSRGGAYNPLTVLADAFSGDFHNFIFCVGSRIPAQVVGSIVGVKFLIDTIPEVGRGPRLNVDIHRGALTEGLLTYAIVTISLGLAATKIHGSFFMKTWISSLSKLTLHILGSDLTGGCMNPAAVMGWAYARGDHITKEHILVYWLAPIEATILAVWTFKLLVRPVKEDKTGSKSVYGIVKNIHMLVLFCKNDGIAFWSFFNTVAR 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01968 266 PANTHER AQUAPORIN SIP2-1-RELATED 5 233 IPR044226 GO:0015267
Car03g01968 266 SUPERFAMILY Aquaporin-like 8 228 IPR023271 -
Car03g01968 266 Pfam Major intrinsic protein 8 218 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car03g01968 266 Gene3D Glycerol uptake facilitator protein. 7 238 IPR023271 -
Car03g01968 266 PANTHER AQUAPORIN SIP2-1-RELATED 5 233 - -
Car03g01968 266 PRINTS Major intrinsic protein family signature 130 148 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car03g01968 266 PRINTS Major intrinsic protein family signature 88 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car03g01968 266 PRINTS Major intrinsic protein family signature 162 184 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car03g01968 266 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car03g01968 266 PRINTS Major intrinsic protein family signature 202 222 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01968 Car-Chr3 65749112 65752162 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01968 7 235 Major Intrinsic Protein MIP AT3G56950 61.739 5.59e-101 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01968 K09875 - gmx:100786138 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01968 03 65749112 65752162 Car03g01968 03 65749112 65752162 ECH