Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01960 ATGGGATCTCATGGTGGAGCAATTCAAGAGCCAAAGACTGGACCTTTGGCTAGAGAAGGGTCTTTATACAATCTTACCCTTGATGAGGTTCAAAATCAGCTTGGAAATTTAGGGAAACCCTTAGGAAGCATGAATCTAGATGAACTACTCAAGAGTTTGTGGACTTCTGAAGCTGCTCAAGCTTCTGGATTGGATTCTGGTACTAATGATGCTTACATGCAGCTAGCTTCTGTGTCATCTATGAATCCACTTACACTCTCTGGTGACCTTAGTAAGAAAACTATTGATGAAGTTTGGAGAGATATGCAACAGAAGAAGAGTATTACTCAGGATAGAAGAACACCTACACTAGGTGAAATGACCTTGGAGGATTTCTTGATGAAAGCTGGTGTGGCTACTGAATCTTTTCCTAATGAGGATAATGCTATTTCAGGAGGTGTTGATTCTCAACAACATGGTCAATGGATGCAGTATCAAATGCCTTcaatgcagcagcaacaacagcagcagcagcaccggcatcatcagaatagtatgatgcctgGTTTTACTGGTTTTATGACTGGCCATGTGGTTCAACAGCCGATCACGGTTGCAGTGAATCCAGTTTTGGATGCAGGATACTCTGAAGTAATGGCTACTACTTCATCGGATACACAAACACCAGGTAGGAAAAGGGATGCCTCTGGTAATGTTGTTGAGAAAACTGTGGAGAGGAGGCAGAAGAGGATGATTAAAAACCGGGAATCTGCAGCTCGGTCGCGCGCAAGAAAACAGGCTTACACCCAAGAACTGGAGATCAAAGTTTCGCGCTTAGAAGAAGAGAATGAAAGGCTTAAAAGACTACATGAGATAGAGAGAGTATTGCCAAGTATGCCGCCACCAGACCCTAAGCATCAGCTTCGCAGAACTAGCTCAGCTCCCCTTTGA 930 0.4054 MGSHGGAIQEPKTGPLAREGSLYNLTLDEVQNQLGNLGKPLGSMNLDELLKSLWTSEAAQASGLDSGTNDAYMQLASVSSMNPLTLSGDLSKKTIDEVWRDMQQKKSITQDRRTPTLGEMTLEDFLMKAGVATESFPNEDNAISGGVDSQQHGQWMQYQMPSMQQQQQQQQHRHHQNSMMPGFTGFMTGHVVQQPITVAVNPVLDAGYSEVMATTSSDTQTPGRKRDASGNVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSRLEEENERLKRLHEIERVLPSMPPPDPKHQLRRTSSAPL 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01960 309 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 237 281 IPR004827 GO:0003700|GO:0006355
Car03g01960 309 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 307 IPR043452 GO:0003700|GO:0045893
Car03g01960 309 MobiDBLite consensus disorder prediction 214 234 - -
Car03g01960 309 CDD bZIP_plant_BZIP46 239 284 - -
Car03g01960 309 Gene3D - 237 289 - -
Car03g01960 309 SMART brlzneu 235 303 IPR004827 GO:0003700|GO:0006355
Car03g01960 309 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 242 257 IPR004827 GO:0003700|GO:0006355
Car03g01960 309 Pfam bZIP transcription factor 239 281 IPR004827 GO:0003700|GO:0006355
Car03g01960 309 SUPERFAMILY Leucine zipper domain 239 283 IPR046347 GO:0003700|GO:0006355
Car03g01960 309 Coils Coil 255 289 - -
Car03g01960 309 PANTHER BZIP TRANSCRIPTION FACTOR 2 307 - -
Car03g01960 309 MobiDBLite consensus disorder prediction 285 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01960 Car-Chr3 65674694 65678473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01960 1 309 bZIP Transcription Factor Family AT3G56850 54.154 1.80e-98 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car03g01960 bZIP_1 6.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01960 K14432 - gmx:100783666 400.208