Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01927 ATGGAAGATAAGAAGCAAAATGACCCAAACAACACTCCAAACCAACATGGTTCCGAGAAAAATGAACCGGTTAGGTCAAGGTGGACACCAAAGCCAGAACAAATTCTCATACTTGAATCCATCTTCAACAGTGGCATGGTGAATCCACCAAAAGAAGAAACAATCAAAATAAGAAAACTTCTTGAGAAATTCGGTAACGTCGGCGACGCCAACGTCTTTTACTGGTTCCAGAATCGGCGGTCTAGATCTCGGCGTCGACAACGACAGATGCAACAAGCCACACTTGAGCAAAGAAATCAGATGTTGATGAAGCAGCCTCAACAACATGTTGATGATGGTGCACATGCAAATATAGCATGTGATGTGGTTCAAAAAATGGGGTTTGGTGGTTCTTCCTCTTCTTTAAATGATTCTTTGGGTTCTTCATCATGTGTTGCTGTTCAACAAGGCATGGATGGTTTCTTTTCACTTTCTTCTCAAATGCCTTTCCATGGAATTCATCAAACTTTAGCTGGATCATCACTTTTTTCTCCACCTCTTTCTCCTAATTTTAACTATCAGCCTGGATATGGAGGTAGTAGTGTTACAGGAATGATAACAGTGTTTATCAATGGAATTGCAACAGAAGTTCAAGCGGGACCAATAGACATGAAAACAGTGTTTGGAGAAGATGTTATGTTACTTCATTCCTCTGGTGTGCCACTTCCTACAAATGAATTTGGCTTCTTCATTCAGTCCTTGCAGCATGGTGAAAGCTACTTTCTGGTATCAAAACCATGA 780 0.4077 MEDKKQNDPNNTPNQHGSEKNEPVRSRWTPKPEQILILESIFNSGMVNPPKEETIKIRKLLEKFGNVGDANVFYWFQNRRSRSRRRQRQMQQATLEQRNQMLMKQPQQHVDDGAHANIACDVVQKMGFGGSSSSLNDSLGSSSCVAVQQGMDGFFSLSSQMPFHGIHQTLAGSSLFSPPLSPNFNYQPGYGGSSVTGMITVFINGIATEVQAGPIDMKTVFGEDVMLLHSSGVPLPTNEFGFFIQSLQHGESYFLVSKP 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01927 259 ProSiteProfiles 'Homeobox' domain profile. 21 86 IPR001356 GO:0003677
Car03g01927 259 SUPERFAMILY Homeodomain-like 19 92 IPR009057 -
Car03g01927 259 SMART HOX_1 23 90 IPR001356 GO:0003677
Car03g01927 259 Pfam Homeodomain 25 85 IPR001356 GO:0003677
Car03g01927 259 Gene3D - 9 104 - -
Car03g01927 259 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 258 - -
Car03g01927 259 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 258 IPR044558 GO:0003700|GO:0048830
Car03g01927 259 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01927 Car-Chr3 65325879 65327818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01927 17 256 Wox Gene Family AT3G03660 53.543 2.70e-67 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Car03g01927 Homeodomain 8.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01927 - - gmx:100791266 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01927 03 65325879 65327818 Car03g01927 03 65325879 65327818 ECH