Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01920 ATGACGGGAAAGGAATCAGAAAACGATGCAACACCAAATGAAAGCGTAAGAGGATACGAAATGATAGACGAAATCAAAAATTTCATAGAAAAAGTGTGTCCATCAATGGTTTCATGTGCCGACATAATATCTTTACCGACGAGATATTTCATTGTTTTAGCTGGAGGACCAAATTACAAAGTCCCAACCGGAAGACGCGATGGAATAATAATATCAACTCTTGAGGAAACAAACATTCCATCGCCAAGATCTTCTATTTCGGATGCATTAAAATCTTTTAATTCAAAAGGCATGACAATGGAAGAAATGGTTACCCTTTTAGGAGCACACACCGTTGGATTCACTTATTGTAATTTAGTTAGAAAAAGGCTCAGTAATGATTCTTCAATGGAACCTAGTTTCGGAAACAAGTTGGTTGGTTTGTGTAGTATGCAAGGTGACCCAAAGGTGTTTTTGGATCAAAACACTTCTTTGGTGTTTGATAATCAACTTTATAATCAATTTTTTTTGGAGAGAGGAGTGTTGGCTTTTGAACAACAATTCGCTTCAGATTCGGTGACGAAAGAGGTTGTGATGAGATTTACTCGAAATGGGGAGAGTTTTATGGAGAGATTTGTTGATGCTATGGTAGAGATGGAAAATATTGGTGTTTTGCTTGGAAATGAGGGATATATTGGGAAGAATTGTAGAGTTTTTAATTCTTAG 705 0.3645 MTGKESENDATPNESVRGYEMIDEIKNFIEKVCPSMVSCADIISLPTRYFIVLAGGPNYKVPTGRRDGIIISTLEETNIPSPRSSISDALKSFNSKGMTMEEMVTLLGAHTVGFTYCNLVRKRLSNDSSMEPSFGNKLVGLCSMQGDPKVFLDQNTSLVFDNQLYNQFFLERGVLAFEQQFASDSVTKEVVMRFTRNGESFMERFVDAMVEMENIGVLLGNEGYIGKNCRVFNS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01920 234 ProSiteProfiles Plant heme peroxidase family profile. 1 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g01920 234 Gene3D Peroxidase, domain 2 80 212 - -
Car03g01920 234 PRINTS Haem peroxidase superfamily signature 153 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g01920 234 PRINTS Haem peroxidase superfamily signature 102 117 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g01920 234 PRINTS Haem peroxidase superfamily signature 55 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g01920 234 PRINTS Haem peroxidase superfamily signature 37 54 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g01920 234 PRINTS Plant peroxidase signature 17 30 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g01920 234 PRINTS Plant peroxidase signature 151 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g01920 234 PRINTS Plant peroxidase signature 55 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g01920 234 PRINTS Plant peroxidase signature 101 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g01920 234 PRINTS Plant peroxidase signature 207 220 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g01920 234 PRINTS Plant peroxidase signature 36 46 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g01920 234 PRINTS Plant peroxidase signature 167 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g01920 234 Gene3D - 3 230 - -
Car03g01920 234 PANTHER PEROXIDASE 44-RELATED 5 231 - -
Car03g01920 234 Pfam Peroxidase 5 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g01920 234 SUPERFAMILY Heme-dependent peroxidases 5 233 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car03g01920 234 PANTHER PEROXIDASE 25-RELATED 5 231 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g01920 234 ProSitePatterns Peroxidases proximal heme-ligand signature. 102 112 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01920 Car-Chr3 65273350 65274054 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01920 3 233 Peroxidase AT4G26010 45.259 2.53e-67 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01920 K00430 - thj:104821377 248.825