Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01917 ATGTGGTTTGGGACGATTATCTTGGTCATTTTGCGCGTGTCTAATGCCTATCAGCGCACAAATTGTAAATTGATACACTCTGGTGATAATAGTTTCGGCGAAAATATCTTTGTGAGCGATCGCGACATCAACAGCACGGACGCAGTGAAATTGTGGGTGGATCAGAAACGATATTATGATTCATCTCGTAACAAATGTGTTGGTGGTGAATGTCACCAATATACTCAAATTGTTTGGAGAAAATCAGTAAGTATTGGATGTTACAAAGTAAAATGTAAAAATGGAGGCACATTTGTTATTTGCTATTATGCTCCCCGTGGCAACATTTTTGCGACAAGAGATTTCATTGTTTTAGCTGGAGAACCAAATTACAAAGTCCCAACCGGAAGACGCGGTGGATTAATAATATCAACTCTTGAGGAAATAAACATTCCATCGCCAAGATCTTCTATTTCAGATGCATTAAAATCTTTTAATTCAAAAGGCATGGCATTGAAAGAAATAGTTACCCTTTTAAGAGCACACGCCGTTGGATTCACTCATTGTGTTTTTGGATCAAAACACTTATTGGTGTTTGATAATCAACTTTATAATCAAATATTTTTGGAGAGAGGAGTATTGGCTTTTGATCAACAATTCGCTTCGGATTCGGTGACGAAAGAGGTTGTGATGAGATTTACTCGAAATGAGGAGAGTTTTATGGAGAGATTTGTTGATGCTATGGTAAAGATGACCTTTTCTGCTAGTTTACAATATGGAGGTAAGTTTGTGAGGGATTTGGTTTTGAATTACATAGGGGGTACTGGGCATGTGGTTCATGGAATTGATGTCGACAAATGGAGTAATTTTGAAGGACTTAGGTTATGA 867 0.3749 MWFGTIILVILRVSNAYQRTNCKLIHSGDNSFGENIFVSDRDINSTDAVKLWVDQKRYYDSSRNKCVGGECHQYTQIVWRKSVSIGCYKVKCKNGGTFVICYYAPRGNIFATRDFIVLAGEPNYKVPTGRRGGLIISTLEEINIPSPRSSISDALKSFNSKGMALKEIVTLLRAHAVGFTHCVFGSKHLLVFDNQLYNQIFLERGVLAFDQQFASDSVTKEVVMRFTRNEESFMERFVDAMVKMTFSASLQYGGKFVRDLVLNYIGGTGHVVHGIDVDKWSNFEGLRL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01917 288 Gene3D Peroxidase, domain 2 189 244 - -
Car03g01917 288 PRINTS Allergen V5/Tpx-1 family signature 71 87 IPR001283 -
Car03g01917 288 PRINTS Allergen V5/Tpx-1 family signature 98 111 IPR001283 -
Car03g01917 288 PRINTS Allergen V5/Tpx-1 family signature 48 61 IPR001283 -
Car03g01917 288 Gene3D - 112 145 - -
Car03g01917 288 Gene3D CAP 12 111 IPR035940 -
Car03g01917 288 Gene3D Peroxidase, domain 2 146 188 - -
Car03g01917 288 PANTHER PEROXIDASE 44-RELATED 110 184 - -
Car03g01917 288 Pfam Peroxidase 109 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g01917 288 PANTHER PEROXIDASE 25-RELATED 190 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g01917 288 Pfam Cysteine-rich secretory protein family 38 103 IPR014044 -
Car03g01917 288 ProSiteProfiles Plant heme peroxidase family profile. 110 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g01917 288 PANTHER PEROXIDASE 25-RELATED 110 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g01917 288 SMART SCP_3 5 111 IPR014044 -
Car03g01917 288 PANTHER PEROXIDASE 44-RELATED 190 255 - -
Car03g01917 288 SUPERFAMILY PR-1-like 21 110 IPR035940 -
Car03g01917 288 SUPERFAMILY Heme-dependent peroxidases 109 248 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01917 Car-Chr3 65260450 65263881 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01917 110 244 Peroxidase AT5G17820 35.838 2.10e-24 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01917 K13449 - gmx:100805116 124.405