Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01911 ATGGTTTTCTGCGATCATTGTGTCAAAAACGTTACCACCGAACGAGTCGATGAATGTTACTTAGTTTGTAGTTCCTGTGGGAAAGTGTTGGAAGATCATTTTTTTGCTGAGGAGACAACTTTTGTTAAAAACTCAGCAGGGCAGAGCAAGGTATCGGGAAATTTTGTATCGTCGATTCGAAACGATATCACTGAATCACGTCAAAGGACTTTAGATAGAGCTCGGGATGAAATGAGATATTTAAGTTTTGGCCTTGGAGTGCATGAGGAAGATATGACCAATAAAGCTGTGGCCTTGTATCGAATAGCACTTGAACGAAATTTCACCCGAGGACGTAAATCAGAGCAAGTACAGGCTGCATGTCTCTATATTGCATTCCGGGATAATAATAAGCCATACCTCCTTATTGATTTTTCAAATTATTTAAGGATTAATGTTTACGTGCTTGGAGCAGTTTTTTTGCAGCTTTGTCAAGTGTTAAGGCTTCAAGAGCACCCAATTGTTCGAAAGCCTATTGATCCTAGTCTTTTTCTTTATAAATATACTAATAGTTTGTTAAAGCATAGAAATGTGGCTGTTTCTGAAACTGCACTGAACATTATTGCGAGTATGAACCGTGACTGGATGCAGACAGGGAGGAAACCCAGTGGATTATTTGGTGCAGCATTATACATTTCTGTTCTTGCACATGGTTTTAACTTCTCTAAGCCAGATATTCTAAGAATCGTCCATGTATGTGAGGCAACATTGACCAAGCGATTGGTAGAATTTGAGAATACAGACTCTTCTAGCTTGACTATTGAGGAGTTGAATACAATGGCAAAAGAGCATGAAAAAAATATGCCTGTATTGTCAAACAGTGAATTCAAAGGATCTACTTCAAAAGATCTACTGTGTGAGCACAAAGCAGATAGCAATGTTCCCCATTTTGCACTTGGACTATGTGAAACATGTTACAAGGATTTTGATAAGCTCTCGGGAGGACTTGGTGGTGGTTTGGACCCTCCTGCATTCCAGCGTGCTGAGAGGGAGAGAGCGAAGAAAATACTTTCTAAGGAAAGTGCCGATGTGGTGAAGCCGTCAAATAGTGCATGCAAGGAACAAAAAGAAGATTTGGCTACCTCTGTGCTAAAAAGGCACAATTTTGGGAGCGAGACCACCAAACATGATGAGTATGATGACTCACATAGAGAAGATGACACCAGTGCAGAAGCTCAAGATGAATCAGGAAATTTGTCTGATATTGATGATGAAGAGGTTGATCCGTACCTAAACAATGAGGAAGAGACAAAATTCAAAAGGATAATATGGGAAAATGAGAACCAAGACTATATCAAGGAGCAAGCTGCCAAGGAGGCATATGCAGAAGCTGAGAAGAAAGCTTTTGAAGAAAATATGAAAAACTGTCCTGAGGATGTACTAGCAGCAAGAGAGCGTTATCAGTCTGCTACTGCAGCTGTGGCAAAATCTAGAAAGGAAATGAAGCAGAGACGAGCTCAACAAACAAAAAATTCAGGGCCTGCTCAATCTGCTGCAGAGGCCGCTTGCCAAATGATGAAAGCGAAGAGACTCAGTAAAAAAATCAATTTTGATTGCTTGGCAAAATTATTTGAAGATGAGCCAGCAAATGCGGGTAATCCCAAGAAAGTACGATTTGATCTACCCTCTGATAATCATGACAAATTTCAATCTAAGGTTGAGGACCAAAAGGATGATGAGCTGAGATCAGCGGATAATTTTGAGGATGGTGACCAGGATAATTTTGAGGATGGTGACCAGGATTGGGATAATAATGAAAATATGGACGGTGCATATTTCCCTGAGGAAGATGATCATAGTTATGATGTCGATTATTACTGA 1860 0.4005 MVFCDHCVKNVTTERVDECYLVCSSCGKVLEDHFFAEETTFVKNSAGQSKVSGNFVSSIRNDITESRQRTLDRARDEMRYLSFGLGVHEEDMTNKAVALYRIALERNFTRGRKSEQVQAACLYIAFRDNNKPYLLIDFSNYLRINVYVLGAVFLQLCQVLRLQEHPIVRKPIDPSLFLYKYTNSLLKHRNVAVSETALNIIASMNRDWMQTGRKPSGLFGAALYISVLAHGFNFSKPDILRIVHVCEATLTKRLVEFENTDSSSLTIEELNTMAKEHEKNMPVLSNSEFKGSTSKDLLCEHKADSNVPHFALGLCETCYKDFDKLSGGLGGGLDPPAFQRAERERAKKILSKESADVVKPSNSACKEQKEDLATSVLKRHNFGSETTKHDEYDDSHREDDTSAEAQDESGNLSDIDDEEVDPYLNNEEETKFKRIIWENENQDYIKEQAAKEAYAEAEKKAFEENMKNCPEDVLAARERYQSATAAVAKSRKEMKQRRAQQTKNSGPAQSAAEAACQMMKAKRLSKKINFDCLAKLFEDEPANAGNPKKVRFDLPSDNHDKFQSKVEDQKDDELRSADNFEDGDQDNFEDGDQDWDNNENMDGAYFPEEDDHSYDVDYY 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01911 619 MobiDBLite consensus disorder prediction 376 418 - -
Car03g01911 619 Gene3D - 63 165 - -
Car03g01911 619 SUPERFAMILY Cyclin-like 75 163 IPR036915 -
Car03g01911 619 MobiDBLite consensus disorder prediction 485 518 - -
Car03g01911 619 Gene3D - 173 263 - -
Car03g01911 619 Gene3D Single helix bin 405 456 - -
Car03g01911 619 MobiDBLite consensus disorder prediction 605 619 - -
Car03g01911 619 Pfam Transcription factor TFIIB repeat 68 156 IPR013150 GO:0017025
Car03g01911 619 Pfam Transcription factor TFIIB repeat 190 259 IPR013150 GO:0017025
Car03g01911 619 CDD CYCLIN 74 144 IPR013763 -
Car03g01911 619 MobiDBLite consensus disorder prediction 541 619 - -
Car03g01911 619 SMART cyclin_7 76 158 IPR013763 -
Car03g01911 619 SMART cyclin_7 176 259 IPR013763 -
Car03g01911 619 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 538 IPR000812 GO:0006352|GO:0070897
Car03g01911 619 MobiDBLite consensus disorder prediction 376 404 - -
Car03g01911 619 PRINTS Transcription initiation factor IIB signature 16 36 IPR000812 GO:0006352|GO:0070897
Car03g01911 619 PRINTS Transcription initiation factor IIB signature 119 138 IPR000812 GO:0006352|GO:0070897
Car03g01911 619 PRINTS Transcription initiation factor IIB signature 213 229 IPR000812 GO:0006352|GO:0070897
Car03g01911 619 Pfam Brf1-like TBP-binding domain 413 538 IPR011665 -
Car03g01911 619 SUPERFAMILY Cyclin-like 172 262 IPR036915 -
Car03g01911 619 MobiDBLite consensus disorder prediction 583 597 - -
Car03g01911 619 MobiDBLite consensus disorder prediction 542 582 - -
Car03g01911 619 PANTHER TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT 1 538 IPR029529 GO:0000126|GO:0000995|GO:0006383
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01911 Car-Chr3 65195541 65214220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01911 1 522 Inorganic Solute Cotransporters AT2G01280 41.132 4.75e-112 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01911 K15196 - gmx:100789154 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01911 03 65195541 65214220 Car03g01911 03 65195541 65214220 ECH