Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01906 ATGGCACCCTTAATTTCCAAGTTCAAACATCAATCAAGAAAACTCACACTTCTCCTCAACATATCTTTCATCTTCCTCCTTTTTCTCCTTCTACAATCCTATCTCAACTCTTCCAACTCAAATTTTAATGATGGCCATGTCAATAATGTTACCTTCACAGCAACCATCTTCAACCATGCCATGTTGCTCAATGACATTAGTGTTGATGGCTGCAATGACCTCCACAACTATTCAGATTATACCTCTAAGTGTTCATATGTCAAAACCACCCTTAGTTGTAGGTCAAAAGGGTACATAAACTATCTTCAAATATTTTATTGCAATCTAGGAAAGTTTCCATTTTTAGGACATTCActtcttgccttatggcttttggttttgttctatcttttggGTGACACAGCTTCCAATTATTTTTGCAATTCCTTAAAGGGTCTTTCCAACATCTTGAATCTCTCTCCTACCATTGCTGGAGTAACCCTTCTTTCACTTGGAAATGGTGCTCCTGATTTTTTTGCGAGTGTTGTTTCTTTCAATGGATCAATTAGCAATAATGATGGTGAAGTTGGCTTAAACACTATTCTTGGAGGTGCTTTTTTTGTGTCTAGTTCTGTTTTGGGGATTATAAGCATCTTAGTTAGTTCAAATCAAGTTGAAGTTGATAAGGCTAGCTTCATTAGAGATGTCATTTTCTTCCTTTTCTCTTTGCTAGTCCTCCTTATCATCATTTCCATTGGTGAAATTACCTTGTTTGGTTCAATTTGCTATGTTTCTATCTACTTTCTCTATGTTTGTGCTGTCTCAACTACACATCTTTTCTATGAAGGGGATAACAATAAGACTAAGAAAGAAAAGGAATTCACTTTATTGTGTTCAGATGAGTTGTTACTGATAGAATCTGGCATACCATTGCTTGGTTATGTTGATAATGAGAATGAGAATGAGAAAGAGAAAAGGAAGTCTAACTTGGCAAAAAAAGTGATACTTGAAGATAAGGAAGAAAAAACAGAAAGTTTTGGTAACGATTCAATTTGTTGTATTTACTTTGGAAAGTTACTTCATTTACTAGAGTTACCACTTTTTTTACCAAGAAGGGTTACTATACCAATTGTGAGTGATGAAAAATGGTCTAAACCATATGGAGTTATATCTGTCACATTAGCACCAATTTTATTGGCAATTATTTGTAATGTCCAAAAGGAAAACATGTGTTCAAGGAATAGTGTAGTTATGTATTTGATAGCTACTTTGATTGGCATAGTTTTGGGAAATATTGCATGTGTGAGCACTAATAGGTGGACCCCACCTAAGAAATCATTGTTTCTATGGCTTGTAGGTGGTTTTATTATGAGCATAACATGGACTTACATAATTGCTCAAGAGCTTGTTTCCATATTGGTTTCAATTGGGAATATAATTGGGATTAGTCCTTCAATCCTTGGATTAACTGTTTTAGCTTGGGGTAATTCTCTTGGTGATTTGATAGCTAATGGTGCTATGGCTTTAAATGGTGGATCAGATGGTGCACAAATGGCTATATCTGGTTGTTATGCTGGTCCTATGTTTAATACTTTGATGGGTTTAGGATTCCCTCTTGTTCTATCATCATGGTCTCATTATCCTCAACCTTATGTCATTCCTAAGGATCACTCACTTTATGAAACAATTTTGTTTTTGATTGGAGGGTTGCTTTGGGCACTTGTGATATTGCCAAAGAAGGATATGAGGTTGGATAAATTATTGGGGGCAGGACTCTTGAGTATATATTTATGTTTTTTGTTTATAAGGATTTCCATGGCTATTGGTAGTATTGAATTCTAG 1821 0.3443 MAPLISKFKHQSRKLTLLLNISFIFLLFLLLQSYLNSSNSNFNDGHVNNVTFTATIFNHAMLLNDISVDGCNDLHNYSDYTSKCSYVKTTLSCRSKGYINYLQIFYCNLGKFPFLGHSLLALWLLVLFYLLGDTASNYFCNSLKGLSNILNLSPTIAGVTLLSLGNGAPDFFASVVSFNGSISNNDGEVGLNTILGGAFFVSSSVLGIISILVSSNQVEVDKASFIRDVIFFLFSLLVLLIIISIGEITLFGSICYVSIYFLYVCAVSTTHLFYEGDNNKTKKEKEFTLLCSDELLLIESGIPLLGYVDNENENEKEKRKSNLAKKVILEDKEEKTESFGNDSICCIYFGKLLHLLELPLFLPRRVTIPIVSDEKWSKPYGVISVTLAPILLAIICNVQKENMCSRNSVVMYLIATLIGIVLGNIACVSTNRWTPPKKSLFLWLVGGFIMSITWTYIIAQELVSILVSIGNIIGISPSILGLTVLAWGNSLGDLIANGAMALNGGSDGAQMAISGCYAGPMFNTLMGLGFPLVLSSWSHYPQPYVIPKDHSLYETILFLIGGLLWALVILPKKDMRLDKLLGAGLLSIYLCFLFIRISMAIGSIEF 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01906 606 Pfam Sodium/calcium exchanger protein 444 597 IPR004837 GO:0016021|GO:0055085
Car03g01906 606 Pfam Sodium/calcium exchanger protein 121 266 IPR004837 GO:0016021|GO:0055085
Car03g01906 606 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 5 605 - -
Car03g01906 606 Gene3D - 381 598 IPR044880 -
Car03g01906 606 Gene3D - 152 284 IPR044880 -
Car03g01906 606 PANTHER CATION/CALCIUM EXCHANGER 1 5 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01906 Car-Chr3 65146659 65148690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01906 69 605 Antiporters AT5G17860 50.464 5.45e-177 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01906 K13754 - gmx:100811635 730.709