Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01870 ATGAATTCCTCAAACGTTATATATTCGATTTTGACAAATCCAAGAGACAAAACCACACAGGTCTGTTTTGATAGGACAACATCTCATGGTTCGGCGCTTTGGATTGAAAATTCATTAGAAACAACATTGCCTGCTTTTGTTCTGCAATTTGCTCTTATCTTAGCAGTCAATCGAATTTTCCTCTTTCTTTTTGAATCATGCAATATACCTCGTATTGTTCCCAACATTTTTACTGGTTTTTTATTAGGTCCATCTGCTCTGGGAAAATGGAAAGATTTCTTCACAACCATATTCCCTTACAACAATATGTTACCTTTAGAGACAGTGGGAGCATTGACACTTATTTACTATGTGTTCTTGGTTGGCTTAGAAATGGACTTGAAACCAATTAAAAGGGGTTACTACAATAAGAAAGCAATGGTTGTTGCAATTGTTGGCATAGTCTTCACTTTACCAATTGGTGCTGGCTTATATTATCTTCTTGTAACAGACATGGGTCAAAAATCATTGTCACATTCAGATAGTGATAAACACGTGAGGGGTGCAATATTTTGGGGAATCACTCTTTCATGTAGTAGTGAGTTTCCTGAAGTTGCTAAAATCCTTTCTGATTTAAAGCTTTTGTTGACAGAGAATGGACAATTGGCTTTAACTTCTTCTTTGATTAATGACTTGTTCTCTTGGACACTCCTTTTGTTGGTTCTAACACAACTATATTATGCTTCTTTTTTGTCACTGTTTGTGATACTCTTACTTGTATTAGCATGTTTTTATGTGATTCATCCTTTTGCTAAGTGGCTTGTTAAAAAAGTTGGAAATGGCGATCGCGAGTTTACCGAGTCACAAGTTGTGTGTCTTCTTCATGTGGTTTTGGTCATTGGATTAATCTCTGATGGGTTGGCTGCACATTCAATTACTGGTGCTTTCTTTTTAGGTGTTATTATCCCAAAGGGTGCACTTAACAATGCGGTTCAAGATAAGGCTTTTGATTTTGTGTCTGAGTTTATGATGCCATTGTTTTTTCTCATTATTGGGGAGAGAACCAATATTCAAGACTTGGCTTTGGATACACATTGGATAACTGTTGTTATTGTTATTGTGTTGGCTTTTATGGTAAAATTGGTGTGCGTATTTGCAGTTTCTTGGATATATCAGATGCCAGTCATTGAAGGATTGTCCCTTGCACTCCTCATGAACACTAAAGGGACAATGCCACTGATAATTTTGTATACTGCCATGGATAGACTAGAATTGGAGAGCCAAAGCTTTGTGGTGATGTTGTTGGCATGTTGGTTAATGACAGCAATTGCGGGTCCTGTCTTAGTTATGATCACAAACTCACTTACCAATGGCAAAGCTATTAGGAAGAGTATGCAACACGGCACAAAACCAGACTCGCCTCTTAGAGTGTTGGCATGTATCCACTCAAAACATGATGCTGAGGCAATCATCGACCTTCTCAAAGCATCAAGTCCATCAGTTAGGTCCCCAATTCAGGTGTTAGCAGTTGAGCTAATCAAGATGACAAACCGACCAACTTCATCACTAATTATTAGAGACGCTCCGAAGCCATCGTTTCACTCAAATTCAAGCAAGGTGGATACCTTAAAGCGAGACAACGGGGACAACCTCGGAAGCTTTGACAACCTCAGTCAGGCCATCTTTGCTGACAAGCTCAGAGTTGTCTCCCACTACAATACCATGCACAAGGACATTGTAAACCTATGCACCGACAAACACGTGAACCTCATCGTTGCCACTCTCAATAAGCAACCAACCTACGACGGGTTGGGTGCAGGCACTGCCACCGCTAGAGCCGTCAACATTATCAACAGGGACCAGGCGAGCAAGGATGAGAAAAAAGTGGTATTGGAGAATCTAGTGAAAGAAGCACCTTGTTGTTTAGCCATTTTTGTTGATCGTGAGTTCAGCGGTGGTCAGCAACATTCTAAAGAAATGAGAATAGCAATGTTCTACATTGGCGGCGCCGATGACCGTGAAGCCCTTTCTTATGCTTGGAGGATGAGTAGGAACATGGAGGTTCAGTTAACAGTAGTGAGGCTTGTTTGGGACAATCCTGAAGATAGGTTTGATGAAAGGGACAGAGAATATTTAAAGGTGTTTGTGCATCAAACAATAGATACACCAACAGTGAGGTATTTGGAGAAGGTGGTGAAGGATGAGAAAGAAACTGTGAGGCTTTTAAATAGGATAGGGAACAAAGGGTTTGATTTGTATATCATTGGAAGAGGACATGGGATGAAGATGTCGTTGGCACAAACAGTGGATCCTGTGTTGGATGAACCTGTATTGGGTCCTCTTGGAGATACTTTATCAGATTTGAATTCTGCTGCTAACACATCCATTTTGATATTTCAAAGAGAAGCTGAACTTCAGCATGGAGATGGTTTGGGGAAACACGAGCGCAATGCTTCTGTGGCGTCTGCACATTCTTTTTATGGTGATGCGGATCCACAGTAG 2481 0.4047 MNSSNVIYSILTNPRDKTTQVCFDRTTSHGSALWIENSLETTLPAFVLQFALILAVNRIFLFLFESCNIPRIVPNIFTGFLLGPSALGKWKDFFTTIFPYNNMLPLETVGALTLIYYVFLVGLEMDLKPIKRGYYNKKAMVVAIVGIVFTLPIGAGLYYLLVTDMGQKSLSHSDSDKHVRGAIFWGITLSCSSEFPEVAKILSDLKLLLTENGQLALTSSLINDLFSWTLLLLVLTQLYYASFLSLFVILLLVLACFYVIHPFAKWLVKKVGNGDREFTESQVVCLLHVVLVIGLISDGLAAHSITGAFFLGVIIPKGALNNAVQDKAFDFVSEFMMPLFFLIIGERTNIQDLALDTHWITVVIVIVLAFMVKLVCVFAVSWIYQMPVIEGLSLALLMNTKGTMPLIILYTAMDRLELESQSFVVMLLACWLMTAIAGPVLVMITNSLTNGKAIRKSMQHGTKPDSPLRVLACIHSKHDAEAIIDLLKASSPSVRSPIQVLAVELIKMTNRPTSSLIIRDAPKPSFHSNSSKVDTLKRDNGDNLGSFDNLSQAIFADKLRVVSHYNTMHKDIVNLCTDKHVNLIVATLNKQPTYDGLGAGTATARAVNIINRDQASKDEKKVVLENLVKEAPCCLAIFVDREFSGGQQHSKEMRIAMFYIGGADDREALSYAWRMSRNMEVQLTVVRLVWDNPEDRFDERDREYLKVFVHQTIDTPTVRYLEKVVKDEKETVRLLNRIGNKGFDLYIIGRGHGMKMSLAQTVDPVLDEPVLGPLGDTLSDLNSAANTSILIFQREAELQHGDGLGKHERNASVASAHSFYGDADPQ 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01870 826 Pfam Sodium/hydrogen exchanger family 57 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Car03g01870 826 PANTHER CATION/H + ANTIPORTER 17 803 - -
Car03g01870 826 Gene3D - 44 453 IPR038770 -
Car03g01870 826 PANTHER CATION/H+ EXCHANGER 3 17 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01870 Car-Chr3 64816903 64820791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01870 13 794 Antiporter Super Family AT2G13620 32.274 1.50e-139 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01870 - - aprc:113862236 1090.49