Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01867 ATGGAAATTCAATTTCAGCAACCAAACATGCAGCAGCAAAATCAGAAAGCAGCCAAAGGAGGAAAGTTCAAAGGAAGAAACAGAAACAGCAACAACACAAACAAATTTGTTGGTGTGAGACAAAGGCCATCAGGTAGATGGGTGGCTGAGATCAAAGACACAACTCAGAAGATAAGAATGTGGCTTGGAACATTTGAGACAGCTGAGGAAGCAGCTAGAGCTTACGACGAAGCCGCGTGCCTTCTTCGAGGATCGAACACTCGAACCAACTTCATCACTCATGTCTCATTGGATTCTCCTCTTGCTTCTCGGATAAGAAATCTTCTTAACAACAAAAAGGGTATCAAAAACAAAGAAGATGTTGTTGCTTGTGCCCCAAGTAACAGCAACACTAGTAGTAATACTAATTCAATTTCAAGCAATGATGATGATAACAAGGAAGATTCTGTTTCAACTAAGGATAATAAAAAAACACAACTTTTTGAGGATGCTTATAAACCTGATTTGAGCAATTGCAAGGAGGATTTTGAGACAGGTTCACAATCCAACATTTCATGGGGTTTTGGACCTTTTTTCGATCGTTTTCCTATCGCTCAATTATTCGATATACCGAAGAATGATGGCATGACTGATGCATCAAGCTTGGAGTTTTCAGAATTTGAAAGAATGAAGGTTGAAAGACAGATATCAGCTTCACTTTATGCTATTAATGGAGTGCATGAGTACATGGAAACTGTTCATGACTCCAATGAAGCCTTATGGGACCTTCCACCTTTGTGCTCATTGTTCTGTTAA 795 0.3937 MEIQFQQPNMQQQNQKAAKGGKFKGRNRNSNNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNKKGIKNKEDVVACAPSNSNTSSNTNSISSNDDDNKEDSVSTKDNKKTQLFEDAYKPDLSNCKEDFETGSQSNISWGFGPFFDRFPIAQLFDIPKNDGMTDASSLEFSEFERMKVERQISASLYAINGVHEYMETVHDSNEALWDLPPLCSLFC 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01867 264 MobiDBLite consensus disorder prediction 124 140 - -
Car03g01867 264 CDD AP2 35 91 IPR001471 GO:0003700|GO:0006355
Car03g01867 264 SUPERFAMILY DNA-binding domain 35 92 IPR016177 GO:0003677
Car03g01867 264 MobiDBLite consensus disorder prediction 1 37 - -
Car03g01867 264 MobiDBLite consensus disorder prediction 141 156 - -
Car03g01867 264 MobiDBLite consensus disorder prediction 1 18 - -
Car03g01867 264 Pfam AP2 domain 35 84 IPR001471 GO:0003700|GO:0006355
Car03g01867 264 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
Car03g01867 264 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 10 251 - -
Car03g01867 264 MobiDBLite consensus disorder prediction 124 156 - -
Car03g01867 264 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Car03g01867 264 PRINTS Ethylene responsive element binding protein signature 58 74 IPR001471 GO:0003700|GO:0006355
Car03g01867 264 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 10 251 - -
Car03g01867 264 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Car03g01867 264 Gene3D AP2/ERF domain 34 93 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01867 Car-Chr3 64780798 64781841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01867 22 264 AP2-EREBP Transcription Factor Family AT5G19790 45.059 2.17e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car03g01867 AP2 5.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01867 K09286 - gmx:100796898 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01867 03 64780798 64781841 Car02g00511 02 5992619 5993707 PCT