Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01855 ATGACAAGACGTTTGATTGATCACTACGATAATGGAGAAAATTCCAATGATAAAAATCGTAATCATAAGCGATTTCGAAGATTTGATGAAATCATTCCTCAACAAAGAGACCTTGAAGAAGAAGTAGGAGAGAACAATGTATGTGAGGATAAAAGTGACACTAGTGACTACATACATGACCAAATCTCTAACATAGATGTTTTGGATTGCAACTTTTGTGGTCAACATTTATGTTTTCCAGTCTTTCAGTGCGTTAGTGGACACATTCTTTGTGGCTCTTGCAATAGCAAAGACAATACGTGTCTGATTTGCAATGTGTCCACCATTCATTGTGATGACATGGACAAGTTACAAATACGTGTGAAAATAGCATGCGACTATGTACAATATGGTTGTAAGGAGCTAGTAAAGCATAGTGAAAAAAATGCACATGAGAATTCATGTGTTTTTTCTCCATGTATATGTCCTCAAAAAGGTTGCAACTTTATTGGCAATTCAAAGGTGTTAGGAGAGCACTTTAAGACAAATCATGAGCTGATTGTACCACCATTTACTTATGATGAAGTTTTCTTTGCCTCCATACATTTTCATGACAAAAACATTGTTCTTCAAGGGAAAACTAATGGAGCACTATTTGTCATCACCAACAAGACTTTCTACATTATGAAAAAGCTCAATGTTTATCACATTGGACCCGAGCCTAAGCCAGAGTATAGTTTTGAAATATTGGCTTGTTCTCCGGAGCCTGATTGCGACAATATACGACTTAAAGCTCAAATCATCAACATTCAGAATTGTGCCTATATTCCATCTTCAAATTCCCTTTTCGTTCCATATGATTATTTTAAACCTCGTGGACGACTCTCTATCAAAATTCGAATAACTAAGATTGGTGATGTTGACTCTAGAGACAACCTATAA 921 0.3583 MTRRLIDHYDNGENSNDKNRNHKRFRRFDEIIPQQRDLEEEVGENNVCEDKSDTSDYIHDQISNIDVLDCNFCGQHLCFPVFQCVSGHILCGSCNSKDNTCLICNVSTIHCDDMDKLQIRVKIACDYVQYGCKELVKHSEKNAHENSCVFSPCICPQKGCNFIGNSKVLGEHFKTNHELIVPPFTYDEVFFASIHFHDKNIVLQGKTNGALFVITNKTFYIMKKLNVYHIGPEPKPEYSFEILACSPEPDCDNIRLKAQIINIQNCAYIPSSNSLFVPYDYFKPRGRLSIKIRITKIGDVDSRDNL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01855 306 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 15 299 IPR044286 -
Car03g01855 306 MobiDBLite consensus disorder prediction 1 20 - -
Car03g01855 306 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 116 173 IPR013083 -
Car03g01855 306 ProSiteProfiles Zinc finger SIAH-type profile. 120 178 IPR013010 GO:0008270
Car03g01855 306 SUPERFAMILY TRAF domain-like 121 294 - -
Car03g01855 306 Pfam Seven in absentia protein family 111 181 IPR018121 GO:0005737|GO:0006511|GO:0007275
Car03g01855 306 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 15 299 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01855 58 179 C3H Transcription Factor Family AT2G41980 29.921 1.22e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01855 K04506 - fve:101305776 157.147