Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01853 ATGCCAGAGTTGAGAAGTGGAGCTAGGAGGTCAAAGCGACTTGGAGATCTTCAGCCTGCTCCACTACCCGTTGATCAAGGAGAGAACTGGACTCAGCCTGCGCAAAATAGAACTAGGAGGAGAGTTGGAGGTGGAAGAGGAAGAGGCGGTAATGCCACTGGTGTAGGTAAAGCGTCTTCACCAGCTGTACCCACAAGGCGAACTGCAGCTGGTAGAGGCCGCGGAGCAAGATTGATTGATTTGGATCCTGAACCTTGTGAGGTCCTTCCAGAACCTGTTGCATTAAGGGCTCCGGAACCTCTTTACAATCACGTAGAGGTAGTCGCCAATAATAATATTGCGATGGAGGGTGGAAGTGGTGATAAGGTTGCAGTAGCTGAAGAAGAGGCAACCACAACCCCCGTGCCTGAGAGGGTACAAGTTGGTAACTCTCCTGTATATAAGACAGAAAGGAAGTTGGGTAAGGGTGGTTTTGGCCAAGTGTATGTTGGCAGAAGGGTTAGCGGTGGATCTGAACGAACAGGTCCTGatgctatcgagGTTGCACTCAAGTTTGAACATAGAAACAGTAAAGGTTGTAATTACGGGCCTCCTTATGAGTGGCAAGTTTACAGCACTCTGAATGGTTGTTATGGCATTCCCTGGGTTCATTACAAGGGTCGACAAGGAGATTTCTACATTTTGGTGATGGACATACTTGGGCCCAGCCTTTGGGATGTATGGAATTCTCTTGGTCAATCGATGTCACCCAGTATGGCTGCTTGCATTGCAGTGGAGGCAATatcaattcttgagaagctccatttgaaaggATTTGTGCATGGAGATGTAAAACCAGAAAACTTTTTGCTTGGTCAACCTGGAACAGCTGATGATAAGAAGTTATATCTTATTGATCTTGGTTTGGCTTCTAGATGGAAGGATGCATCATCTGGTCAACACGTTGAATATGATCAGAGACCTGATATATTCAGGGGAACGATAAGGTATGCTAGTGTACATGCACATTTAGGTAGGACTGGCAGTCGAAGGGATGATCTTGAGTCACTGGCGTACACATTGATATTTCTCATAAAAGGGAGATTGCCATGGCAGGGTTATCAGGGCGACAATAAAAGTTTTCTTGTTTGTAAGAAAAAAATGTCCACTTCTCCGGAGTTGATGTGCTGCTTTTGTCCTGCTCCATTTAAGCAGTTCCTTGAAGCAGTTACTAACATGAAATTTGACGAGGAGCCAAATTATTCCAAGCTTATATCACTTTTTGACAGCTTGATCGAACCATGCACTCCATTAAGACCTATTAGAATTGATGGAGCTTTAAAGGTTGGTCAAAAGCGAGGACGGATGCTTATAAATCTGGAAGAAGATGAGCAGCCTAAGAAAAAAGTGCGATTAGGAAGTCCTGCTACTCAGTGGATATCAGTGTATAATGCACGCCGTCCCATGAAGCAGAGATATCACTATAACGTAGCAGACAATAGACTCCGGCAGCATGTAGACAAGGGTATTGAGGATGGGCTGTATATAAGCTGTGTGGCCTCTTCAGCGAATTTGTGGGCTCTAATCATGGACGCAGGAACAGGGTTTTCTTCCCAGGTTTACGAGTTATCACCAGCCTTCCTGCACAAGGATTGGATTATGGAGCAATGGGAGAAAAATTACTATATCAGTTCAATAGCTGGTGCAGTTAATGGGAGTTCCTTGGTTGTCATGTCCAAAGGGACTCCTTATACACAGCAGTCCTACAAAGTGAGCGAATCATTTCCTTTCAAATGGATAAACAAGAAATGGAAAGAAGGATTCCATGTTACCTCCATGACTACTGCTGGCAGTCGCTGGGGTGTTGTCATGTCCAGGAATGCTGGGTATTCTGATCAGGTTGTGGAGCTTGACTTTTTGTATCCAAGTGAAGGAATCCATCGTCGATGGGAGAACAACTACCGAATTACTTCTATGGCTGCTACTAGTGATCAGGCAGCCTTCATACTTAGCATACCTAAACGCAAATTACTTGATGAAACTCAAGAAACTCTGCGTACATCTGCTTTCCCCAGCACACATGTAAAGGAAAAATGGTCCAAGAATCTCTACATTGCTTCAATTTGTTACGGGCGAACTGTTTGCTAG 2127 0.4396 MPELRSGARRSKRLGDLQPAPLPVDQGENWTQPAQNRTRRRVGGGRGRGGNATGVGKASSPAVPTRRTAAGRGRGARLIDLDPEPCEVLPEPVALRAPEPLYNHVEVVANNNIAMEGGSGDKVAVAEEEATTTPVPERVQVGNSPVYKTERKLGKGGFGQVYVGRRVSGGSERTGPDAIEVALKFEHRNSKGCNYGPPYEWQVYSTLNGCYGIPWVHYKGRQGDFYILVMDILGPSLWDVWNSLGQSMSPSMAACIAVEAISILEKLHLKGFVHGDVKPENFLLGQPGTADDKKLYLIDLGLASRWKDASSGQHVEYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMSTSPELMCCFCPAPFKQFLEAVTNMKFDEEPNYSKLISLFDSLIEPCTPLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRLGSPATQWISVYNARRPMKQRYHYNVADNRLRQHVDKGIEDGLYISCVASSANLWALIMDAGTGFSSQVYELSPAFLHKDWIMEQWEKNYYISSIAGAVNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWENNYRITSMAATSDQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01853 708 ProSiteProfiles Protein kinase domain profile. 147 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01853 708 CDD STKc_CK1 147 421 - -
Car03g01853 708 MobiDBLite consensus disorder prediction 1 74 - -
Car03g01853 708 PANTHER CASEIN KINASE-RELATED 101 682 - -
Car03g01853 708 ProSitePatterns Protein kinases ATP-binding region signature. 153 184 IPR017441 GO:0005524
Car03g01853 708 PANTHER OS01G0772600 PROTEIN 101 682 - -
Car03g01853 708 SMART serkin_6 147 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01853 708 Pfam Protein kinase domain 147 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01853 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Car03g01853 708 Gene3D Transferase(Phosphotransferase) domain 1 113 464 - -
Car03g01853 708 SUPERFAMILY Protein kinase-like (PK-like) 147 434 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01853 Car-Chr3 64670125 64677770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01853 252 421 MAP Kinase Kinase Kinase AT5G50180 23.837 2.14e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Car03g01853 Pkinase 1.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01853 - - gmx:100801967 1344.33