Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01848 ATGAAAATGGACGTGTGCCAAAATGTATCAGTTTCTGATGACTGCAAACAAGAGAAGGTTCTTTCTACCTTCTCAACTAGCCTTGATGACCTCTTTTCTACACAGAACATGGAAGTGGATGTTGGAATGGAATGGCTTTCAGTGTTTGTGGAAGACTGTTTTTCAAGCCCTCAAAGTTGTGTGTTATTACCTTCTAATGTTcaaaacaccacaacaacaacaacaacaacaatctcaacaaaacCTTCAAACACAATGAAGAGACAAAACCAAAATGAGTCACCTTTACAAAATTTCACAATTCCAGGGAAAGCAAGGAGCAAAAGGAAGAGACTTTCAGCTCCAAGAACAAACAAAAACCCTTTAAGCATTTGGTCAAACACCTTAAACCCAAAAAATGAACTAATTGGTTGTGACCCTCCACTTCTGAAACAAGCTTATTGGTTAGCTGACAGTGAACTAATAGTTCCAAAGGGTGAGAAAAATGTAGTGGAAAAGGAAATTGTTGTGAAAAAGGAAGAAAAAATAGAGGATGATATTGTTTTTAAGaatgaaaatgaaaatgaaaatgaaagtgaaaatAGTTCAATTCCAACAAGAAGGTGCACACATTGTTTGTCACAAAGGACCCCACAATGGAGAGCAGGACCATTAGGTCCAAAGACATTATGCAATGCATGTGGTGTAAGGTACAAATCTGGTAGGTTGTTACCAGAGTATAGACCAGCTAAGAGTCCAACTTTTGTTAGCTATTTACATTCCAATTCACATAAGAAAGTCATGGAGATGAGGAATATGTCTTCTTCCATTCCTACTCATGACTGA 825 0.3455 MKMDVCQNVSVSDDCKQEKVLSTFSTSLDDLFSTQNMEVDVGMEWLSVFVEDCFSSPQSCVLLPSNVQNTTTTTTTTISTKPSNTMKRQNQNESPLQNFTIPGKARSKRKRLSAPRTNKNPLSIWSNTLNPKNELIGCDPPLLKQAYWLADSELIVPKGEKNVVEKEIVVKKEEKIEDDIVFKNENENENESENSSIPTRRCTHCLSQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRNMSSSIPTHD 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01848 274 Gene3D - 193 268 IPR013088 GO:0006355|GO:0008270
Car03g01848 274 Pfam GATA zinc finger 202 236 IPR000679 GO:0006355|GO:0043565
Car03g01848 274 MobiDBLite consensus disorder prediction 72 119 - -
Car03g01848 274 ProSitePatterns GATA-type zinc finger domain. 202 227 IPR000679 GO:0006355|GO:0043565
Car03g01848 274 PANTHER GATA TRANSCRIPTION FACTOR 3 270 - -
Car03g01848 274 PANTHER GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 3 270 - -
Car03g01848 274 ProSiteProfiles GATA-type zinc finger domain profile. 196 232 IPR000679 GO:0006355|GO:0043565
Car03g01848 274 SMART GATA_3 196 250 IPR000679 GO:0006355|GO:0043565
Car03g01848 274 MobiDBLite consensus disorder prediction 72 101 - -
Car03g01848 274 CDD ZnF_GATA 201 248 IPR000679 GO:0006355|GO:0043565
Car03g01848 274 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 199 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01848 Car-Chr3 64631791 64633471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01848 14 264 C2C2-Gata Transcription Factor Family AT4G32890 39.844 1.72e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Car03g01848 GATA 1.8e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01848 - - gmx:100786479 344.354