Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01841 ATGGGAACCCCACAGTCCAATTTGCCACCAGGTTTTAGGTTCCACCCAACTGATGCAGAGCTTATACTTCACTACCTTAGGAAGAAAATTGCCTCCATTCCCTTGCCTGTTTCCATCATTGCTGAAGTTGATATTTACAAGTTGGATCCATGGGAATTACCAGCAAAGGCTTCATTTGGTGAGAAAGAATGGTACTTTTTCAGTCCAAGAGATAGAAAGTACCCAAATGGTGCAAGGCCAAACAGGGCAGCTGCTTCAGGGTATTGGAAGGCTACTGGCACTGACAAGACCATAGTGGCATCATTGCCAAGTGGAGGGAGAAGGTCACATGACAACATTATTGGTGTCAAAAAAGCTCTTGTTTTCTACAAAGGAAAACCCCCAAAGGGTGTTAAGACTAATTGGATCATGCATGAATATCGCCTTGTAGATAACAACAAACCTATTAAGCTCAAAGATTCCTCCATGAGGTTGGATGATTGGGTACTATGCCGAATTTACAAGAAATCAAAATGTGCACTATCTTTAACAGAGGCAGAAACAATGGTAGGTGATGTAGATCAAGCAAAAGAGACCCAAATAAAGGACACCCTTTTCCAAATCACAAAAAATTCAACCTCTCCTAATCAAAACACACTTATGTCTCAAAAATCAATGTCATTCTCCAACCTTTTAGATGCTATGGACTATTCCATGTTAAGCAGCTTCTTATCTGAAAACCATTCTAACCCATCAGGAATTGGATCAAGTACAAGTTTCAACACTGAAAATTTTAATCAACCATCCTCACAAATCAACACCAACAACAATTACATGTTTCAGAAGAACACTTCAAAGCAACAACTTTCAAACATAGATGAAGACACTTTATTATACCAATCAAAGAAATACTTGAATTCCTCTTGCAATTTCCCTAACATTAATTCCCAATACGAGAATTACCTCATGAAGCAATCTCTATTGAATCAACAATTGATTCTAGGACCTCACCTCCAATTTCAAGGCTAA 1008 0.3869 MGTPQSNLPPGFRFHPTDAELILHYLRKKIASIPLPVSIIAEVDIYKLDPWELPAKASFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVASLPSGGRRSHDNIIGVKKALVFYKGKPPKGVKTNWIMHEYRLVDNNKPIKLKDSSMRLDDWVLCRIYKKSKCALSLTEAETMVGDVDQAKETQIKDTLFQITKNSTSPNQNTLMSQKSMSFSNLLDAMDYSMLSSFLSENHSNPSGIGSSTSFNTENFNQPSSQINTNNNYMFQKNTSKQQLSNIDEDTLLYQSKKYLNSSCNFPNINSQYENYLMKQSLLNQQLILGPHLQFQG 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01841 335 PANTHER NAC TRANSCRIPTION FACTOR 56 5 288 - -
Car03g01841 335 ProSiteProfiles NAC domain profile. 8 169 IPR003441 GO:0003677|GO:0006355
Car03g01841 335 PANTHER OS01G0104200 PROTEIN 5 288 - -
Car03g01841 335 Pfam No apical meristem (NAM) protein 9 142 IPR003441 GO:0003677|GO:0006355
Car03g01841 335 SUPERFAMILY NAC domain 4 169 IPR036093 GO:0003677|GO:0006355
Car03g01841 335 Gene3D NAC domain 17 173 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01841 Car-Chr3 64544009 64546159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01841 4 335 NAC Transcription Factor Family AT3G04070 53.541 1.21e-108 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car03g01841 NAM 2.5e-40 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01841 03 64544009 64546159 Car03g01841 03 64544009 64546159 ECH