Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01840 ATGGAGTTCCTAATTACACTCATAACATTTCTACTCTTCTTAATACCTTCAATCACTTCCTCCTCACAATATTTAGGAAACAACCTACTCACTAATCGAAAGATATTCCAAAAACAAGAAACAATTACCTCTTACGCTGTTATTTTTGATGCTGGTAGCACTGGAAGCCGTGTCCATGTTTACCATTTTGATCAAAACTTAGATCTTCTTCATATTGGTAAAGATGTTGAGTTTTATAATAAGATCAAACCCGGTTTGAGTGCATATGGTGATAATCCTGAACAAGCTGCAAATTCTTTGATTCCACTTTTAGAGCAAGCACAGAATGTGATTCCTGAGGACGTGCACCCCAAAACACCCGTTAGACTTGGGGCAACCGCAGGTTTAAGGCTTTTAGATGGGGATGCTTCGGAAAAGATATTGCAAGCGGTTAGAGATATGCTCAGCAACAGAAGTAGCTTCATTGTTCAACCAGATGCAGTTTCTATTATAGATGGAACTCAAGAAGGTTCTTATTTGTGGGTGACAGTTAACTATGTATTGGGAAATTTGGGAAAAAAGTACACAAAAACAGTGGGAGTAATGGACCTTGGAGGTGGATCCCTTCAAATGGCATATGCTGTCTCAAAGAAAACAGCTCAAAATGCTCCAAAAGTTGCTGATGGAAATGATCCATACATTAAGAAGATTGTACTCAAGGGAAAACCATATGATCTCTATGTTCACAGTTACTTACACTTTGGTAGAGAAGCTTCTCGAGCAGAGATTTTGAAGGTCACTAAGCATTCTGCTAATCCTTGTATTTTAGCCGGATTTGATGGGATCTACACATATTCAGGAGAAGAATACAAGGCCACTGCCCCTGCTTCTGGGGCCAACTTCAATAAATGCAAAAAGATAATTCGTAAGGCTCTTAAATTGAATTATCCATGTCCCTATCAGAACTGCACTTTTGCTGGAATATGGAACGGTGGAGGAGGAAGTGGACAAAAACACCTTTTTGCTACTTCATCTTTCTTTTACCTACCAGAAGATGTTGGTATGGTTGACTCAAAGACACGTAACTTCAAAATTCGTCCTCTGGATCTCGAGATTGAAGCTAAGAGAGCTTGTTCATTAACATTTGAGGATGCCAAATCGACTTATCCACTTCTTGTTGAGGAGAAAATAGTTCCATATGCATGCATGGATCTTTTATATCAGTATGAGTTGCTCGTTGATGGATTTGGCTTAGATCCATTGCAAGAAATTACAGCTGGAAAGGAAATTGAATATCAAGATGCTATTGTTGAAGCTTCATGGCCTCTTGGAAATGCTGTTGAAGCCATATCATCGCTACCTAAATTTGAACGACTGATGTATTTTGTTTAA 1371 0.3873 MEFLITLITFLLFLIPSITSSSQYLGNNLLTNRKIFQKQETITSYAVIFDAGSTGSRVHVYHFDQNLDLLHIGKDVEFYNKIKPGLSAYGDNPEQAANSLIPLLEQAQNVIPEDVHPKTPVRLGATAGLRLLDGDASEKILQAVRDMLSNRSSFIVQPDAVSIIDGTQEGSYLWVTVNYVLGNLGKKYTKTVGVMDLGGGSLQMAYAVSKKTAQNAPKVADGNDPYIKKIVLKGKPYDLYVHSYLHFGREASRAEILKVTKHSANPCILAGFDGIYTYSGEEYKATAPASGANFNKCKKIIRKALKLNYPCPYQNCTFAGIWNGGGGSGQKHLFATSSFFYLPEDVGMVDSKTRNFKIRPLDLEIEAKRACSLTFEDAKSTYPLLVEEKIVPYACMDLLYQYELLVDGFGLDPLQEITAGKEIEYQDAIVEASWPLGNAVEAISSLPKFERLMYFV 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01840 456 Gene3D Exopolyphosphatase. Domain 2 165 424 - -
Car03g01840 456 Pfam GDA1/CD39 (nucleoside phosphatase) family 40 447 IPR000407 GO:0016787
Car03g01840 456 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 164 179 IPR000407 GO:0016787
Car03g01840 456 CDD NBD_sugar-kinase_HSP70_actin 47 231 - -
Car03g01840 456 PANTHER NOD FACTOR-BINDING LECTIN-NUCLEOTIDE PHOSPHOHYDROLASE 1 456 - -
Car03g01840 456 Gene3D - 45 439 - -
Car03g01840 456 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 1 456 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01840 Car-Chr3 64514896 64518658 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01840 44 445 Calmodulin-binding Proteins AT3G04080 55.087 1.43e-153 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01840 K14641 - ag:CAA83655 766.148