Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01830 ATGGCTGATGGTGAATCAGACAAGAATATCGAGATATGGAAGATCAAGAAGCTGATCAAAGCACTGGAAGCTGCAAGAGGTAATGGTACTAGCATGATTTCTCTGATTATGCCTCCGCGCGATCAAATATCTCGTGTAACTAAGATGTTGGGAGATGAATTTGGTACTGCTTCAAATATCAAGAGCAGGGTAAACCGACAATCTGTGCTGGGAGCTATAACTTCTGCTCAACAGAGGTTGAAACTTTATAATAAGGTTCCTCCAAATGGATTGGTTCTTTATACTGGTACCATTGTCACTGATGATGGCAAGGAAAAGAAAGTGACAATTGACTTTGAACCTTTCAAACCAATCAATGCGTCACTTTATCTCTGTGATAACAAATTTCACACAGAAGCTCTAAATGAACTTCTAGAATCTGATGACAAGTTTGGTTTTATTGTTATGGATGGAAATGGAACCCTTTTCGGGACTTTAAGTGGAAATACTCGTGAGGTGCTTCATAAATTTACCGTTGATCTGCCAAAGAAACACGGTAGAGGAGGGCAGTCAGCTTTGCGTTTTGCTCGTCTTCGCATGGAAAAACGGCACAATTATGTTAGGAAGACCGCAGAGCTTGCTACTCAGTTTTTCATCAACCCTGCCACTAGTCAGCCTAATGTTGCCGGACTCATACTTGCCGGTTCGGCCGACTTCAAGACCGAGCTGAGTCAGTCTGATATGTTCGATCCTCGTTTGCAAGCAAAGATATTGAATGTGGTTGATGTTTCCTATGGTGGGGAAAATGGCTTTAATCAAGCAATTGAATTATCAGCAGAGATTCTATCTAATGTGAAGTTCATACAAGAGAAGCGCTTGATAGGAAAATATTTCGAAGAGATAAGCCAAGAAACCGGGAAATATGTTTACGGGGTTGATGACACATTGAAGGCACTGGAGATGGGAGCTGTTGAAACACTCATTGTATGGGAGAATTTGGATATTAATAGATATGTGCTGAAAAATGCTACCACCAGTGAGATTGTCATAAAGCACATGAACAAGGAACAAGAAGGTAATCAAAGCAACTTCCGCGATGCAGCCACCTCGGCCGAGTTAGAGGTTCAGGAGAAGATGCCACTACTTGAGTGGTTTGCGAACGAGTATAAGCGATTCGGATGCTCACTGGAATTTGTGACCAACAAATCTCAAGAAGGGTCACAGTTTTGCAGAGGGTTTGGTGGTATTGGAGGTATGCTTCGCTACCAGCTTGACATAAGATCATTTGATGAGTTGTCTGATGATGATGGAGTGTACGAGGATTCTGATTAA 1311 0.4195 MADGESDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQETGKYVYGVDDTLKALEMGAVETLIVWENLDINRYVLKNATTSEIVIKHMNKEQEGNQSNFRDAATSAELEVQEKMPLLEWFANEYKRFGCSLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDIRSFDELSDDDGVYEDSD 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01830 436 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 11 416 IPR004403 GO:0003747|GO:0006415
Car03g01830 436 Gene3D - 278 436 IPR029064 -
Car03g01830 436 Pfam eRF1 domain 2 143 276 IPR005141 -
Car03g01830 436 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 1 436 - -
Car03g01830 436 Pfam eRF1 domain 3 280 417 IPR005142 -
Car03g01830 436 SMART eRF1_1_2 3 139 IPR005140 -
Car03g01830 436 SUPERFAMILY L30e-like 277 419 IPR029064 -
Car03g01830 436 SUPERFAMILY Translational machinery components 141 275 - -
Car03g01830 436 Gene3D eRF1 domain 1 1 134 IPR024049 -
Car03g01830 436 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 6 139 IPR024049 -
Car03g01830 436 Gene3D eRF1 domain 2 135 276 IPR042226 -
Car03g01830 436 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 1 436 IPR004403 GO:0003747|GO:0006415
Car03g01830 436 Pfam eRF1 domain 1 17 137 IPR005140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01830 Car-Chr3 64363095 64365895 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01830 1 436 Eukaryotic Initiation Factors Gene Family AT3G26618 92.202 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01830 K03265 - egr:104419069 819.69