Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01815 ATGCAAGGCTTTGCAAATAGAGAAGCCGTGGTTTCAACCATATCTTCTCGCAAGGCCACATTCTATAGCCGGTCACGATCAACATTGTGGACCAAAGGAGAGACCTCTAATAATTTTATCAATATCCATGATGTCTTTCTTGATTGCGGCCGTGATTCTGAATACCCTAAAAGCCAACCTTTTATAAGAGAGCATAAGAGGCAAGAGATAGTTCTATTGGATAATGAAATATCCTTCAATGAGGCCATGATTGAAGAAAGAGATCAGGGTCTTAGGGAGGTGGAAGAGCAAATTGGACAAATAAATGAAATATTCAAGGACCTTGATGTTCTGGTTCATGATCAGGGGATTGTTATTGATGACATTCAATCAAATATAGATACTTCAGCTAGTACAACAGCTCAAGCTAAGGTCCAGCTAGCCAAAGCTTCCAAAAGTGTGAAATCCAAAACTTCATGGTATTGGTGGGTGCTTGCAATATTTATAGTGGTGGTGATCATTTTAGTTATTGCACTCATTATTTAG 525 0.3886 MQGFANREAVVSTISSRKATFYSRSRSTLWTKGETSNNFINIHDVFLDCGRDSEYPKSQPFIREHKRQEIVLLDNEISFNEAMIEERDQGLREVEEQIGQINEIFKDLDVLVHDQGIVIDDIQSNIDTSASTTAQAKVQLAKASKSVKSKTSWYWWVLAIFIVVVIILVIALII 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01815 174 CDD SNARE_Qa 84 142 - -
Car03g01815 174 PANTHER SYNTAXIN 57 173 IPR045242 -
Car03g01815 174 Gene3D - 75 174 - -
Car03g01815 174 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 81 143 IPR000727 -
Car03g01815 174 Pfam Phosphoribosyl-AMP cyclohydrolase 1 53 IPR002496 GO:0000105|GO:0004635
Car03g01815 174 PANTHER SYNTAXIN-22-LIKE 57 173 - -
Car03g01815 174 SMART tSNARE_6 76 143 IPR000727 -
Car03g01815 174 Pfam SNARE domain 118 169 IPR000727 -
Car03g01815 174 SUPERFAMILY t-snare proteins 67 136 IPR010989 GO:0016020|GO:0016192
Car03g01815 174 Gene3D - 1 60 IPR038019 -
Car03g01815 174 SUPERFAMILY HisI-like 1 53 IPR038019 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01815 Car-Chr3 64258806 64260572 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01815 49 161 SNARE and Associated Proteins AT5G46860 53.982 2.97e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01815 - K08488 gsj:114389394 160.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01815 03 64258806 64260572 Car03g01815 03 64258806 64260572 ECH