Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01814 ATGAGTTTTCAAGATATTCAAGGTGGGTCCAACCCTCCTTCTCGGCGAAATCAGTCACCGTCGCAAGCCATCGCTGCCGGAATTTTCCAGATCAACACCGCTGTTGCTACTTTCCGGCGATTAGTCGATTCCGTTGGAACCGTTAAAGACACTCCAGAACACCGTCAGAAATTGCACAATACAAGGCAGAGGATATTGCAGCTGGTGAAGGATACTTCTGCTAAGCTTAAATCTTTGTCTCAATCTAATCGTGATGCTAATGCCAatGCTAGTAAGAAAATTGAAGATGCTAAGCTGGCAAGAGATTTCCAAACCACATTGCAAGAATTCCAGAAAGTTCAACACCTTGCTTCTGAGCGCGAATCAACTTACACTCCTGCTGCCCCTGCTTCTTCTTTACCAACAAGCTCTGGCCCTGGTCAAGAATCGGTTGAGGAATACCCTGAAAGCCAACCTTTTATAAGAGAGCATAAGAGGCAAGAGATAGTTCTATTGGATAATGAAATATCCTTCAATGAGGCCATGATTGAAGAAAGAGATCAGGGTCTTAGAGAAGTGGAAGAGCAAATTGGACAAGTAAATGAAATATTCAAGGATCTTGCTGTTCTGGTTCAAGATCAGGGGATTGTTATTGATGACATTCAATCAAATATAGATACGTCAGCTGGTACAACAGCTCAAGCTAAGGTCCAGCTAGCCAAAGCTTCCAAAAGTGTGAAATCGAAAACTTCATGGTGTTGGTGGGTGCTTGCAATTTTTATAGTGGTGGTGATCATTTTAGTTATTGCACTCATTATTTAG 801 0.4232 MSFQDIQGGSNPPSRRNQSPSQAIAAGIFQINTAVATFRRLVDSVGTVKDTPEHRQKLHNTRQRILQLVKDTSAKLKSLSQSNRDANANASKKIEDAKLARDFQTTLQEFQKVQHLASERESTYTPAAPASSLPTSSGPGQESVEEYPESQPFIREHKRQEIVLLDNEISFNEAMIEERDQGLREVEEQIGQVNEIFKDLAVLVQDQGIVIDDIQSNIDTSAGTTAQAKVQLAKASKSVKSKTSWCWWVLAIFIVVVIILVIALII 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01814 266 Coils Coil 69 89 - -
Car03g01814 266 MobiDBLite consensus disorder prediction 1 20 - -
Car03g01814 266 SUPERFAMILY t-snare proteins 19 228 IPR010989 GO:0016020|GO:0016192
Car03g01814 266 Gene3D - 167 266 - -
Car03g01814 266 MobiDBLite consensus disorder prediction 114 144 - -
Car03g01814 266 PANTHER SYNTAXIN-22-LIKE 14 265 - -
Car03g01814 266 SMART tSNARE_6 168 235 IPR000727 -
Car03g01814 266 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 173 235 IPR000727 -
Car03g01814 266 CDD SNARE_Qa 176 234 - -
Car03g01814 266 MobiDBLite consensus disorder prediction 114 152 - -
Car03g01814 266 PANTHER SYNTAXIN 14 265 IPR045242 -
Car03g01814 266 Gene3D - 9 132 - -
Car03g01814 266 Pfam SNARE domain 210 261 IPR000727 -
Car03g01814 266 SMART SynN_4 8 122 IPR006011 GO:0016020
Car03g01814 266 Pfam Syntaxin-like protein 24 124 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01814 Car-Chr3 64249613 64252313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01814 1 253 SNARE and Associated Proteins AT5G46860 57.588 1.14e-101 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01814 - K08488 gsj:114389394 394.045