Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01800 ATGGCTCTCGTTTTTCCTCTTCTTTTATCTCTTCTCTTTCACCCCTTTCTTCTCTTCTTCACAACCTATCACGCAAATGCCTTCAATTCTTCGATTCATAACGACGCATTGCCCCTTCTCACCTTCAAACACTTCGTCTCTTCCGACCCTTCAAATCTCCTCGCCGGTTGGACTCGGAGTTCCTCTTCCTCTCTCTGCCGCTGGCACGGCGTCACTTGCGGCGGTGGAGACGGCAGAGTAACAATCCTTCGCGTCACCGGTCTTCGAGGTGGTGAATTGGCTTCTTCAATCGGAGACATTTCGGAGCTTCGCGTTTTGTCTATTCCCGGAAACATGTTCTCCGGCGAGATTCCGACGAGTTTAGTGAACCTCCGGGAACTCGAGGTTCTTGAGCTTCAAGGTAACAACTTTTCAGGGAGATTACACTTTCAGATGAGTTATCTTGAATCACTTATCATTGTTAATCTCTCTGGTAATGCTTTTTCTGGTTCTATTCCTAATGGGATGGTTTTTTCTAGAAATGTGAAAATTGTTGATTTGTCTAATAATCAATTTTCTGGTTCAATTCCTTTGAATGAAAATGGTTTTATTAGTAGTTGTGATTCTTTGAAGCATTTGAAGCTTTCTCATAACTTTTTGAGTGGTGAGATTCCACCCCAAATTGGGAAATGTAGAAACTTGAGAACCCTTTTGGTTGATGGAAACATTTTGGAAGGTAGAATCCCTCGTGAGATTGGTTATGCTGTTGAACTTAGAGTTCTAGATGTTTCTAGAAACAGTCTCACTGGAAGGATCCCTAGGGAGTTAGTTAATTGTTTGAATTTGTCTGTGCTTGTGCTTACTGATTTGCTCGATGATCGCAATGGCGGTAATGATGAGGGAAGTTTGGAGGATAGTTTTAGAGGTGAATTCAATGCTTTTGTTGGGAATATTCCTCATGAAGTTTTGTTGCTTTCGAGTTTGCGGGTTTTGTGGGCGCCTAGAGCGAATCTTGGTGGACGGTTACCTGCTGGATGGACAGATTCATGCTCTCTAAGAGTACTCAATTTGGCAGAGAATTATGTTGCTGGTGTTGTGCCTGGGAGTTTAGGGATGTGTAAGAATTTAACTTTCTTGGATTTGAGTTCTAACAATTTGGTTGGACATCTTCCTCTGCAGAAGCTTAGGGTTCCTTGTATGACGTATTTCAATGTAAGCAAGAATAATTTATTGGGCACACTTCCGGGATTTAGGAAAGAAAGGTGTAAAGTGGGTGGCATTATTGCGCTAGAACCTGCATTTCTAGAATTGGAAGGTTTGAATGATGCATACTTTAACATTCCTGTTTTGAGATTTCAAGAGAATGCTTTCATTGGATCGTCAGGTTTCGAAGAGATTACTGTCGTTACCCACGATTTCAGCTGGAACGGTTTTGTGGGACCTTTACCTTTGTTCTTTCTCGGAGATGCTCATTTAACTGCAAATCGGAAAGTCTCCTATATGCTGTCTTTGAATAATAATAAATTCAATGGAACTCTACCGGACCAACTAGTTTCAAACTGTAATGACCTCAAGACATTGTCGGTTAACCTGAGTGTGAACAAACTATCCGGTGAGGTTTCCCAATCTTTGTTTCTCGACTGCCTGCAGTTGAAGGATTTTGAAGCAGCGTACAATCAAATTGATGGATCAATTGGACCTGGTATAGGTGAGTCGTTGTTGCTTCAGCGTCTGGATTTGCGCGGGAACAAACTATCTGGAGTACTTCCAAATGAGTTAGGAAATCTGAAAAACATGAAATGGATGCTTTTAGGAGGAAACAATCTTACAGGTGAAATTCCTTACCAACTTGGTAGATTAACTTCACTTCTTGTTTTAAATGTATCACACAATGTTCTAATTGGAACAATTCCACCAACTTTGTCAAATGCCACGAGTCTTGAAATTCTGTTGCTAGATCACAACAACCTTTCAGGGGAAATACCTTTATCCGTTTCTGCTCTTTCGAATCTTGTTCAACTAGATGTGTCTTTCAACAATCTTTCGGGTCATATTCCACACTTTCAACACACTAGTGATTGTGATTCCTATAAAGGGAATAAACACCTGCACTCTTGCCCCGACTCGTACTTCGACTCGCCCACTTCTCGCGCAACAGCTCCTCTTGTGGACAAGAATTCACACAGTCATAGAGGGAGGAAATTAAGGACTGTGGTTATTGCCTTGGCTGCTTCTGCTTTTGCGGTTCTCTGCACACTTTTGGGAATAGTGTTGGTGATTTGTTTTAGAAGGAGTAAATTTAGTCGGATTAGCAGTATACGAAGGCGAGAAGTTGTGACATTTCAAATTGTCCCAACAGAATTGAGTTATGAGAGTGTAGTCACGGCCACCGGAAATTTCAGCATCCGGTATCTTATCGGCACGGGAGGCTTTGGTTCAACTTACAAGGCAGATCTATCACCAGGTTTTCTTGTTGCCATAAAGAGACTGTCCATAGGTAAATTTCAAGGCATGCAACAGTTTGAAACAGAAATAAGGACGCTCGGGAGAATTCGACACAAGAATCTTGTGACTCTAATCGGCTATTACGTAGGAAAGGCCGAAATGTTCTTGATTTACAACTACCTATCTGGTGGAAACCTTGAAGCTTTCATACATGACAGGTCAGGGAAAAATGTGCAATGGCCGGTTATTTACAAAATAGCGAAAGACATAGCGGAGGCTCTTGCTTACCTTCATTACGCTTGTGTTCCTCGCATAGTTCACCGAGATATCAAGCCTAGCAACATTTTACTCGATGAAAATCTTAATGCCTATCTGTCTGATTTTGGCTTGGCACGACTGCTTGAGGTATCTGAGACTCATGCTACTACTGATGTGGCAGGCACATTTGGTTATGTTGCGCCCGAATATGCCACTACTTGTAGGGTTTCTGACAAAGCTGATGTTTATAGCTACGGCGTAGTGTTATTAGAATTGATATCCGGAAGAAGGTCGCTTGATCCGTCGTTTTCTAATTATGGAAATGGATTCAATATAGTACCATGGGCGGAGCTGCTAATGACTGAAGGTCGTTGTTCGGAGCTATTTTCGTCTGCTTTGTGGGAATCAGGGCCTAAGGAAAAGTTGCTGGGGCTTTTAAAGATTGCATTAACATGCACAGAAGAGACTCTTTCTATTCGACCGTCGATGAAGCATGTTCTTGAGAAATTGAAACAGTTGAAAAGTTGA 3210 0.4193 MALVFPLLLSLLFHPFLLFFTTYHANAFNSSIHNDALPLLTFKHFVSSDPSNLLAGWTRSSSSSLCRWHGVTCGGGDGRVTILRVTGLRGGELASSIGDISELRVLSIPGNMFSGEIPTSLVNLRELEVLELQGNNFSGRLHFQMSYLESLIIVNLSGNAFSGSIPNGMVFSRNVKIVDLSNNQFSGSIPLNENGFISSCDSLKHLKLSHNFLSGEIPPQIGKCRNLRTLLVDGNILEGRIPREIGYAVELRVLDVSRNSLTGRIPRELVNCLNLSVLVLTDLLDDRNGGNDEGSLEDSFRGEFNAFVGNIPHEVLLLSSLRVLWAPRANLGGRLPAGWTDSCSLRVLNLAENYVAGVVPGSLGMCKNLTFLDLSSNNLVGHLPLQKLRVPCMTYFNVSKNNLLGTLPGFRKERCKVGGIIALEPAFLELEGLNDAYFNIPVLRFQENAFIGSSGFEEITVVTHDFSWNGFVGPLPLFFLGDAHLTANRKVSYMLSLNNNKFNGTLPDQLVSNCNDLKTLSVNLSVNKLSGEVSQSLFLDCLQLKDFEAAYNQIDGSIGPGIGESLLLQRLDLRGNKLSGVLPNELGNLKNMKWMLLGGNNLTGEIPYQLGRLTSLLVLNVSHNVLIGTIPPTLSNATSLEILLLDHNNLSGEIPLSVSALSNLVQLDVSFNNLSGHIPHFQHTSDCDSYKGNKHLHSCPDSYFDSPTSRATAPLVDKNSHSHRGRKLRTVVIALAASAFAVLCTLLGIVLVICFRRSKFSRISSIRRREVVTFQIVPTELSYESVVTATGNFSIRYLIGTGGFGSTYKADLSPGFLVAIKRLSIGKFQGMQQFETEIRTLGRIRHKNLVTLIGYYVGKAEMFLIYNYLSGGNLEAFIHDRSGKNVQWPVIYKIAKDIAEALAYLHYACVPRIVHRDIKPSNILLDENLNAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSYGVVLLELISGRRSLDPSFSNYGNGFNIVPWAELLMTEGRCSELFSSALWESGPKEKLLGLLKIALTCTEETLSIRPSMKHVLEKLKQLKS 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01800 1069 Pfam Protein kinase domain 798 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01800 1069 Gene3D Ribonuclease Inhibitor 91 283 IPR032675 -
Car03g01800 1069 Gene3D Ribonuclease Inhibitor 298 434 IPR032675 -
Car03g01800 1069 SMART serkin_6 793 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01800 1069 ProSitePatterns Protein kinases ATP-binding region signature. 799 827 IPR017441 GO:0005524
Car03g01800 1069 Gene3D Phosphorylase Kinase; domain 1 755 868 - -
Car03g01800 1069 ProSitePatterns Serine/Threonine protein kinases active-site signature. 913 925 IPR008271 GO:0004672|GO:0006468
Car03g01800 1069 SUPERFAMILY L domain-like 308 684 - -
Car03g01800 1069 SUPERFAMILY L domain-like 34 408 - -
Car03g01800 1069 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 16 1068 - -
Car03g01800 1069 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 16 1068 - -
Car03g01800 1069 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Car03g01800 1069 Gene3D Ribonuclease Inhibitor 456 704 IPR032675 -
Car03g01800 1069 Gene3D Ribonuclease Inhibitor 29 90 IPR032675 -
Car03g01800 1069 SUPERFAMILY Protein kinase-like (PK-like) 770 1064 IPR011009 -
Car03g01800 1069 ProSiteProfiles Protein kinase domain profile. 793 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01800 1069 CDD STKc_IRAK 799 1067 - -
Car03g01800 1069 ProSiteProfiles Leucine-rich repeat profile. 368 389 IPR001611 GO:0005515
Car03g01800 1069 Gene3D Transferase(Phosphotransferase) domain 1 869 1068 - -
Car03g01800 1069 Pfam Leucine Rich Repeat 251 272 IPR001611 GO:0005515
Car03g01800 1069 Pfam Leucine Rich Repeat 202 224 IPR001611 GO:0005515
Car03g01800 1069 Pfam Leucine Rich Repeat 568 589 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01800 Car-Chr3 63982106 63986729 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01800 11 1068 Receptor kinase-like Gene Family AT3G02130 43.307 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Car03g01800 Pkinase 8.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01800 - - cam:101512699 2070.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01800 03 63982106 63986729 Car03g01800 03 63982106 63986729 ECH