Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01790 ATGGTTTCTGAGAAGAGTGAAATGAGCCCTAAGCTCAAAATCACCGTGAAATATGGCGGAAAAGAAACGGAATCGAAGGATACGCCAATGCAGCAGCGGAGATCGAGTGCTAGAATTCAAGCGAAGCAAAAAGAGGTTGAGGAGATTAAGCTTCGGAGGATAGCGGAGGTCGTAGAGGAGAAAGAAAAATCCGGCGAGGTAGTGACGGCGAAGTCGAACAAGCGGAAGAAAATTAACGACGAGGAGAGTGTGGTTAAGGAAGAGGTTGTTTCGGAGCAACagaagaagaagaagaaaagTCACTGCGAGGAAAGTCTGGTTAAGGAAGAGGATGTTTCGGAGCAACAGAAGAAGAAGAAAACTAACGGGGAGGAGAGTGTGGTTAAGGAAGAGGTAGTTTCGGAGCAACAGAAGAAGAAAAAGAAGTCGCCAGCTACTGCGAGACGTGAGCTGATGGAGGTTCGGAATGAAGAAATAACGGTGGGTTCGGAAAATGCGGTTGGTGCATTGGGTGACAAGAGCTTAACCGCTAAGGTGAAGGATACGATTAGGGTGTTTAATAAACACTATCTTCATTTGATTAAGGACGAGGAGGAGAGGTGTGCTAAAGCGAAAGCCGAATCTGAGAAGAAGAAGAAAGCTGGTAAAAAAGTTTCGAAGGCTGAAGCTGAGAAGAAGAAAACTGGTAAAAAAGATTCAGCAAAGAAAGACATTCAACCCAATGATTCAAAGCACGCTGCCAAGCGACCTGATCTGAAGGCTTTAACCAAGATGATGCAAAATAATGAGATACTGTATCCTGAGAAAAGAATTGGCAACATTCCAGGTATTGAGGTTGGATATCAGTTCTATTCTCGTGCTGAAATGGTAGCTGTTGGTTTTCATAGCCACTGGTTAAATGGCATTGATTTTATCGGCCAGTCTTATTCCAAAGTGTACAGCTGCTACGAACTCCCAGTTGCAGTGGCCATTGTTTTGTCAGGCATGTATGAGGATGATCTGGATAACGCAGAGGATGTTGTGTACACTGGTCAAGGTGGGCATAATCTGACTGGTGATAAGCGTCAAATGGGAGATCAAAAAATGGAGCGGGGCAATTTAGCACTCAAGAACTGTGCAGAGCAATGTGTGCCAGTTAGGGTGGTTCGAGGTCATGAATCTTCTAGCAGTTACACTCGTAAAGTCTACACATATGATGGTTTGTACAAGGTTGTCAATTATTGGGCAGAGAAGGGAATATCTGGCTTCACAGTCTACAAGTTTCGGCTTAGGAGGGTTGAGGGACAGCCTACATTAACCACAAATCAGGTTTATTTCACATGTGGACGTGTACCTCAGTCTGTAGCAGAAATACGAGGGTTGGTATGTGAAGATATCAGTGGCGGTCAAGAAGATGTGCCTATTCCTGCTACAAATTTGGTTGATGACCCCCCTGTTCCACCCACAGGTTTCAAATATTGTAAGTCTCTGAAGGTTGCAAAAAGTGTTAAGCTTCCCGTGAATGCCCCTGGGTGCAAATGCAAAGGCATTTGTAATGATCCAACAACTTGCGAATGTGCGAAGCGCAATGGCTCTGAATTTCCCTATGTATCTAAGGATGGTGGCAGATTAGTTGAAGCCAAAGATGTTGTGTTTGAATGTGGTCCCAATTGTGGTTGTGATGATCGTTGCGTGAACCGAACTTCTCAAAAAGGACTTCGATATCGTCTTGAGGTTTTCCGTACTGCAAAGAAAGGATGGGCTGTTAGATCCTGGGATTTTATACCTTCTGGAGCACCAGTTTGTGAGTACACAGGAATACTTGCAAGGACAGAAGATATGGACAGTGTATTGGAAAACAACTATATTTTTGAGATAGATTGCTTGCAAACAATCAAGGGACTTGGTGGAAGAGAGAGGCGGTCACAAAATGTACCATTTGCTGTAAATCTGTTGGACAAATATGATGACCAAGGTTCTGAAAGTGCACCAGAGTTTTGCATTGATGCAGGATCTACTGGAAATATTGCTAGGTTTATAAACCATTGTTGTGAGCCTAATTTGTTTGTACAATGTGTTTTGAGCACACACCATGATTTGCGATTGGCTCGAGTGATGCTCTTTGCTGCTGACAACATACCCCCTTTACAGGAGCTGACATATGACTATGGCTATGAGCTTGATAGCGTCTTAGACTCTGATGGCAAGATAAAGCAAATGCCGTGCTATTGCGGAGCTACAGGCTGCAGGAAGCGATTATTCTAA 2244 0.4358 MVSEKSEMSPKLKITVKYGGKETESKDTPMQQRRSSARIQAKQKEVEEIKLRRIAEVVEEKEKSGEVVTAKSNKRKKINDEESVVKEEVVSEQQKKKKKSHCEESLVKEEDVSEQQKKKKTNGEESVVKEEVVSEQQKKKKKSPATARRELMEVRNEEITVGSENAVGALGDKSLTAKVKDTIRVFNKHYLHLIKDEEERCAKAKAESEKKKKAGKKVSKAEAEKKKTGKKDSAKKDIQPNDSKHAAKRPDLKALTKMMQNNEILYPEKRIGNIPGIEVGYQFYSRAEMVAVGFHSHWLNGIDFIGQSYSKVYSCYELPVAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKRQMGDQKMERGNLALKNCAEQCVPVRVVRGHESSSSYTRKVYTYDGLYKVVNYWAEKGISGFTVYKFRLRRVEGQPTLTTNQVYFTCGRVPQSVAEIRGLVCEDISGGQEDVPIPATNLVDDPPVPPTGFKYCKSLKVAKSVKLPVNAPGCKCKGICNDPTTCECAKRNGSEFPYVSKDGGRLVEAKDVVFECGPNCGCDDRCVNRTSQKGLRYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGILARTEDMDSVLENNYIFEIDCLQTIKGLGGRERRSQNVPFAVNLLDKYDDQGSESAPEFCIDAGSTGNIARFINHCCEPNLFVQCVLSTHHDLRLARVMLFAADNIPPLQELTYDYGYELDSVLDSDGKIKQMPCYCGATGCRKRLF 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01790 747 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 81 747 IPR025794 GO:0016571
Car03g01790 747 SMART G9a_1 267 429 IPR003105 -
Car03g01790 747 ProSiteProfiles YDG domain profile. 272 425 IPR003105 -
Car03g01790 747 Coils Coil 187 224 - -
Car03g01790 747 Gene3D - 254 441 IPR036987 -
Car03g01790 747 SUPERFAMILY SET domain 453 723 IPR046341 -
Car03g01790 747 Pfam SET domain 579 717 IPR001214 GO:0005515
Car03g01790 747 Pfam Pre-SET motif 460 560 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Car03g01790 747 ProSiteProfiles Pre-SET domain profile. 503 565 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Car03g01790 747 SMART PostSET_3 731 747 IPR003616 -
Car03g01790 747 MobiDBLite consensus disorder prediction 17 31 - -
Car03g01790 747 ProSiteProfiles Post-SET domain profile. 731 747 IPR003616 -
Car03g01790 747 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 32 746 - -
Car03g01790 747 Pfam SAD/SRA domain 271 429 IPR003105 -
Car03g01790 747 MobiDBLite consensus disorder prediction 206 249 - -
Car03g01790 747 SMART preset_2 456 552 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Car03g01790 747 Gene3D SET domain 449 747 IPR046341 -
Car03g01790 747 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 32 746 - -
Car03g01790 747 SUPERFAMILY PUA domain-like 254 444 IPR015947 -
Car03g01790 747 SMART set_7 568 723 IPR001214 GO:0005515
Car03g01790 747 MobiDBLite consensus disorder prediction 60 151 - -
Car03g01790 747 ProSiteProfiles SET domain profile. 568 717 IPR001214 GO:0005515
Car03g01790 747 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01790 Car-Chr3 63786346 63796385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01790 258 747 EF-hand Containing Proteins AT5G13960 66.191 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Car03g01790 SAD_SRA 4.3e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01790 K11420 - gmx:100796701 1010.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01790 03 63786346 63796385 Car03g01790 03 63786346 63796385 ECH