Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01787 ATGTCCATCTTGCCCTCACAAACCCAAGCCGCATCTTCATCCTCTTCGTCTTCCTCAACTTCCAACCCTAATCCCCAATATGGAATTCCAGATACCTTCTCTTCTCCTTCCCCAATACTCAATCACGCTCTCGGATCGCTCCAGATCTCCGATTATCCAGGTCCATCAACTCCAGCTGCAGAGAATACTGGTGGATCCTCCGAAAAGGTGACGGAATTAGGGTCTTCAAGCGGTATGAAGGCACCTCAGCATAACTCTAGAACTCATTCTAGGAGTCAATCAGGAAGACGGGCATTTGGATCGCCCCAGTCCGCAGGGAAGACAACAGGAACAGTTTCTTCTCATAGAAATCAACAGACTACCGGCTCTGTAAATTCTCATGGAAGCACCCCTTTGGCAGGGAGGAAATCTCAGATGGTGAATGGCAATCACTTGCTCAATTTTCAGTATGATCCAATATCCCGTTCGCAACAAAGGGGtcctcctcctccccctcctGCCAGAAGGCAGCGGAAGAGAAGACCATACAACAAAGATTTGTTTTTGCAGGCAAATTTTAAATTCATGGTGCTAGATTCAGGAAATTATTCGCCGGAGTCAATGGATCCAGATAAAATGTTGCAGTGGGAAGATATTATATGTGTGACATATTTGACCCCCTTTCCAGTTCAGTGTCCAATTTGTTTGGAGCATCCCCTGTGTCCCCAAATAACCTCATGTGGACACATTTTCTGTTTCCCATGTATTCTACAATACTTGTTGTTGGGTGAAGAGGATCACAAAGGTGATTGCTGGAAAAGGTGTCCGTTGTGCTTTGTGATGATATCTGTCAAGGATTTATATACAGTCCACATCACAAATGTCAAACAGTATCAAGTAGGAGATAATATTGAGTTCACTTTCTTAACGAGGAAGAAGGATTCATTTAATCTGTCGCATAAAAATAAACAAGAGACTGATAACTCGTCATGTGGCCAAGGAGAAATATGTGATCCTTTTTCTAAGTTCACACTCACGTCAGATGTAGATCTCTCAGTGAGACATGCAATATCAGATCTAGATGGTTGGCTTGCCAGAGCTGATTCAGGTCTTGTTGACGACCTGGAGAAGCTTCCTTATGTTTGTGCTGCAATGCAGCAATTAAAACAGAGAAAGAAGTACTGGAATGAGCTCAAAGTTTGTGACAGTGAAAAATCCTCTAAGCTCATTGATTGTGCACTCCAGATACCATCAATATCTGCAAATGCTGTGGATACTGATGACGAAAACTGTTCTAACGGATCAAGAGCTTCCTCTACTGATTTCCCCGATCAAAGTAAGGTTGTAATATTGGATAAGTCAACTGCTGGATCAAGTCAGGATGAAACTTTGGATGTGGATAAGGTGCTAGTAGAGCAGGAAATGAATTTGTCTTCTTCATATGAGGAGAAAAATTGTATTCAAGGGCTTTCAAATGGCATCGAAGATGCAAAGGAAAATGATTCATACAATTTCTATCAGGCTGCTGATGGTCAACATCTAATTCTTCATCCTTTGAACACAAAATGTTTACTGCACCATTATGGTGGCTATGATATGCTTCCTCACAGAATAAGTGGAACGATTCTACAATTGGAGACAGTTACTCAATCTGAAGCTATGAGGAGGCGGTATCGATTTTTAAGTCATTTTCCGTTGACCACAATATTTCAGCTTTGTGAAGTTGATTTGAGCGAGATGTTGCCTCCTGAAGCACTGGCCCCATTTATGGATGAAATAAAGAAACGTGCAATCCAGAGGAAGCAACTTGCAAAGAAGGAACTGAAGGAAAAATTAAAGGCTGAAGCTACTTCCAATTATGCTCTTCCCATATCAACCAGTTATCAGTTTATTTCTCGTGATGATCCTCCCACATTCTCCATGGATGACTTTGAAGCTCTAGGAAATTCAGCTATGTCATCAAGTCCTCCAGTTGTTGGGGAGAGAAAATTATTCTCAAGTGTTGCTAGGCTTGGTTTTGCTGCTGGTCATGATTCTCCATCCTTTCAAACTCAAGAAACTAGTGATCTACATATTAACAATTCGATCACTGGTTCTTCTAGTACATCAGGTTTGAGAAATGGGGGGACACCATCATACTCCAATGTCATATCTAGACCAGAATCTAATGGAAGTTCAAATACACCAAAGACAAATGACTTGGGAAAGAAGGGAAAGAAACCAAACCGAGTTCTTCTGTCAACAGCTGGTGGCAGGCGTTATTGA 2244 0.4135 MSILPSQTQAASSSSSSSSTSNPNPQYGIPDTFSSPSPILNHALGSLQISDYPGPSTPAAENTGGSSEKVTELGSSSGMKAPQHNSRTHSRSQSGRRAFGSPQSAGKTTGTVSSHRNQQTTGSVNSHGSTPLAGRKSQMVNGNHLLNFQYDPISRSQQRGPPPPPPARRQRKRRPYNKDLFLQANFKFMVLDSGNYSPESMDPDKMLQWEDIICVTYLTPFPVQCPICLEHPLCPQITSCGHIFCFPCILQYLLLGEEDHKGDCWKRCPLCFVMISVKDLYTVHITNVKQYQVGDNIEFTFLTRKKDSFNLSHKNKQETDNSSCGQGEICDPFSKFTLTSDVDLSVRHAISDLDGWLARADSGLVDDLEKLPYVCAAMQQLKQRKKYWNELKVCDSEKSSKLIDCALQIPSISANAVDTDDENCSNGSRASSTDFPDQSKVVILDKSTAGSSQDETLDVDKVLVEQEMNLSSSYEEKNCIQGLSNGIEDAKENDSYNFYQAADGQHLILHPLNTKCLLHHYGGYDMLPHRISGTILQLETVTQSEAMRRRYRFLSHFPLTTIFQLCEVDLSEMLPPEALAPFMDEIKKRAIQRKQLAKKELKEKLKAEATSNYALPISTSYQFISRDDPPTFSMDDFEALGNSAMSSSPPVVGERKLFSSVARLGFAAGHDSPSFQTQETSDLHINNSITGSSSTSGLRNGGTPSYSNVISRPESNGSSNTPKTNDLGKKGKKPNRVLLSTAGGRRY 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01787 747 MobiDBLite consensus disorder prediction 1 136 - -
Car03g01787 747 SMART ring_2 225 271 IPR001841 -
Car03g01787 747 MobiDBLite consensus disorder prediction 670 747 - -
Car03g01787 747 MobiDBLite consensus disorder prediction 671 725 - -
Car03g01787 747 CDD RING-HC_RNF10 225 272 - -
Car03g01787 747 Pfam Zinc finger, C3HC4 type (RING finger) 225 271 IPR018957 GO:0046872
Car03g01787 747 PANTHER RING FINGER 10 FAMILY MEMBER 84 743 IPR039739 -
Car03g01787 747 SUPERFAMILY RING/U-box 224 278 - -
Car03g01787 747 ProSitePatterns Zinc finger RING-type signature. 240 249 IPR017907 -
Car03g01787 747 Coils Coil 587 607 - -
Car03g01787 747 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 220 307 IPR013083 -
Car03g01787 747 ProSiteProfiles Zinc finger RING-type profile. 225 271 IPR001841 -
Car03g01787 747 MobiDBLite consensus disorder prediction 152 175 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01787 55 697 C3H Transcription Factor Family AT3G26730 52.388 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01787 - - gmx:100798764 1107.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01787 03 63737765 63743618 Car03g01787 03 63737765 63743618 ECH