Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01774 ATGATGATGAATGAAGGAGGAGATAAAGTGGTGGTGATTCAGAAAAACGAGGCGACTGGTTTAATGGCAGGTGTTGAAGGTGAAGTTGAGTTTGTCAACAAAACAGGGGACAATAACATTAACGGGTCGGGTCATAAGATCCATGATGTTTTTGTTGCTGCTGCATTCGGAACTGTTCATAGGAAGAAAAGGATGGCCAGACATAGAAGAAGAtcttcatcttcttcttcttcttcttcttctCTcatcaacaccaacaccaacaacaacagcaccaTTACCATTCATCTCAAAAACCTTCCTTCTACTGCTACTACTTCCTCCTCGCACGTGCCTCTTTCTCCAATTCCAACTCTTTTTCCTTCCACTACTCTCCCTCCCGCACGTGAAATTGATCATAAGAGGTTGAGATTCCTTTTTCAAAAGGAGTTGAAGAACAGTGATGTTAGCTCCCTTAGGAGAATGGTATTGCCAAAGAAAGCAGCGGAGGCTTTCCTTCCTGCCCTTGAGTCAAAGGAAGGAATTCTTATCAGCATGGATGATATAGATGGTCTTCATGTATGGAGTTTCAAGTACAGGTTTTGGCCAAACAATAATAGTCGGATGTATGTACTTGAAAATACTGGAGATTTTGTAAGCACGCATGGTCTACGCTTAGGAGATTCTATCATGGTTTACCAAGATAATCAAAATCACAATTATGTAATTCAAGCAAAAAAAGCATGTGATCAAGATGAATATATGGAAGGAACTAGTGATACCATCAATGATATCTTCTTTAATGATTATGAGGTGAACAAAAGTTGTTTTGATGTAACCTATCCTACAATGAATGATACAAGCATGTCATTCATATATGAAACAACCATCTCAAATGACTCACCACTTGATTTTTTGGGTGGATCAATGACCAATTACTCAAGGATTGGATCAGTTGAAACATTTGGCTCTGTTGAGAATTTGTCGCTTGATGACTTCTACTGA 984 0.3659 MMMNEGGDKVVVIQKNEATGLMAGVEGEVEFVNKTGDNNINGSGHKIHDVFVAAAFGTVHRKKRMARHRRRSSSSSSSSSSLINTNTNNNSTITIHLKNLPSTATTSSSHVPLSPIPTLFPSTTLPPAREIDHKRLRFLFQKELKNSDVSSLRRMVLPKKAAEAFLPALESKEGILISMDDIDGLHVWSFKYRFWPNNNSRMYVLENTGDFVSTHGLRLGDSIMVYQDNQNHNYVIQAKKACDQDEYMEGTSDTINDIFFNDYEVNKSCFDVTYPTMNDTSMSFIYETTISNDSPLDFLGGSMTNYSRIGSVETFGSVENLSLDDFY 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01774 327 MobiDBLite consensus disorder prediction 72 88 - -
Car03g01774 327 SUPERFAMILY DNA-binding pseudobarrel domain 138 241 IPR015300 -
Car03g01774 327 ProSiteProfiles B3 DNA-binding domain profile. 140 242 IPR003340 GO:0003677
Car03g01774 327 Gene3D - 136 253 IPR015300 -
Car03g01774 327 Pfam B3 DNA binding domain 140 237 IPR003340 GO:0003677
Car03g01774 327 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 52 327 IPR044800 GO:0003700
Car03g01774 327 SMART B3_2 140 242 IPR003340 GO:0003677
Car03g01774 327 CDD B3_DNA 138 240 IPR003340 GO:0003677
Car03g01774 327 MobiDBLite consensus disorder prediction 61 88 - -
Car03g01774 327 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR FUS3 52 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01774 Car-Chr3 63624784 63628509 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01774 42 327 B3 DNA Binding Superfamily AT3G26790 47.222 6.45e-84 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Car03g01774 B3 2.1e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01774 - - gmx:100783961 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01774 03 63624784 63628509 Car03g01774 03 63624784 63628509 ECH