Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01765 ATGGGTCGTTGTCCATGTTTTGGGTCTAGAAAGAAGAGAAAAGGGAAGAATCTCAATGATGAAGAAGAGGAAAGGGATGTTGAGAAGAGTCTTAAATCTGTTGGGACTGTCTCTGTCTCTGGAAGATCATCAGAACAGAGACCAGAAGCTACTCCAGAAGAGGTTCCTGATAGTTCTGGTAAGGCTCGAATATTTACCTTCAGAGAGCTTGCAACGGCGACAAAAAATTTTAGGGACGAAACCTTTATCGGGCAAGGAGGATTTGGAACTGTTTACAAAGGAAAGATAGATAAAATTAGTCAGTTTGTAGCTGTTAAAAGACTTGATACAACTGGTGTCCAAGGGGAGAAAGAATTTCTAGTAGAAGTTCTCATGCTCTCTCTTCTACACCATCCCAATCTCGTTAATATGATCGGTTATTGCGCTGAAGGAGACCAACGACTTCTTGTGTACGAATACATGCCTTTGGGATCCTTAGAATCTCATCTCCATGATCTTCCGCCTGATAAAGAACCACTTGATTGGAATACCAGAATGATGATAGCTTCTGGGGCTGCAAGAGGACTAAATTATCTGCACCATGAAGCGAAGCCTTCAGTTATATACAGAGATTTGAAAACATCCAACATACTATTGGATGAAGAATACTATCCAAAGCTTTCTGATTTTGGGCTTGCGAAATTTGGTCCGACCGGAGACCAATCATATGTTGCTACTAGAGTGATGGGAACACATGGTTATTGTGCGCCTGAGTATGCAACTACCGGAAAATTAACAATGAGATCTGACATATACAGTTTTGGAGTTGTGTTATTGGAGTTGATTACTGGACGTAGAGCATATGATGATAACCGCGGCCATGAAAAGCATCTTGTTGATTGGGCACGCCCAATGTTTAGAGACAAAAGGAATATTTCGAGATTAGTAGATCAACGTTTGCAAGGTAACTACCCTGTATCTGGTCTAAGGATGGCCGTCGAGTTAGCATGTATGTGTCTTCGAGAAGAGCCACGTCTCCGGCCTGATGCAGGCGATATAATACTAGCATTTGATTACTTGACATCCAAGCAATATGTTTCAAAAGTATCTGAAATAGTTAACGTGGTAGGGATGGAGAACGATGAATCCCTGAAAGAAACATCTGTGATTTTGACTAAAGACTCTCTAAGAGAGCAAGCTGTTGCAGAGGCTAAGCAATGGGGGGAGACATGGAGAGATAAGAGAAGACAATGCGGTCAAAATAGTCCTGATGAAATAAGGAGGTAA 1266 0.4163 MGRCPCFGSRKKRKGKNLNDEEEERDVEKSLKSVGTVSVSGRSSEQRPEATPEEVPDSSGKARIFTFRELATATKNFRDETFIGQGGFGTVYKGKIDKISQFVAVKRLDTTGVQGEKEFLVEVLMLSLLHHPNLVNMIGYCAEGDQRLLVYEYMPLGSLESHLHDLPPDKEPLDWNTRMMIASGAARGLNYLHHEAKPSVIYRDLKTSNILLDEEYYPKLSDFGLAKFGPTGDQSYVATRVMGTHGYCAPEYATTGKLTMRSDIYSFGVVLLELITGRRAYDDNRGHEKHLVDWARPMFRDKRNISRLVDQRLQGNYPVSGLRMAVELACMCLREEPRLRPDAGDIILAFDYLTSKQYVSKVSEIVNVVGMENDESLKETSVILTKDSLREQAVAEAKQWGETWRDKRRQCGQNSPDEIRR 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01765 421 Pfam Protein kinase domain 78 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01765 421 PANTHER OS07G0668900 PROTEIN 4 370 - -
Car03g01765 421 PANTHER OS07G0668900 PROTEIN 4 370 - -
Car03g01765 421 SUPERFAMILY Protein kinase-like (PK-like) 56 347 IPR011009 -
Car03g01765 421 SMART serkin_6 77 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01765 421 MobiDBLite consensus disorder prediction 1 60 - -
Car03g01765 421 CDD STKc_IRAK 83 347 - -
Car03g01765 421 Gene3D Phosphorylase Kinase; domain 1 48 153 - -
Car03g01765 421 MobiDBLite consensus disorder prediction 13 31 - -
Car03g01765 421 ProSiteProfiles Protein kinase domain profile. 77 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01765 421 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Car03g01765 421 Gene3D Transferase(Phosphotransferase) domain 1 154 373 - -
Car03g01765 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01765 Car-Chr3 63536728 63541588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01765 6 410 Glycoside Hydrolase AT3G07070 51.435 3.87e-138 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Car03g01765 Pkinase 6.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01765 K13430 - gmx:100809298 599.356