Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01762 ATGGCTTTGGACTTCTTAGCTGAGTTCGACCAACCAGATTGTCGTAGGTTACCTGTTGGATACAGGTTTGATCCAACTGATGATGTTCTTGTGTGTTTTTACCTCAAGAAAAAGGTCTATAATTTAACTCTTCCATATCATGCCATTCTTGACTTTGATGTGTTTCAGACTGAGCCATGGTTGCTGCCAGGAGATTTGAATGCTTTCAAGGACAGGAGGTACTATTTCTTTGACATAAGGCAACGTGAATTTGACAACATGGATATAAGACCTGCTGGAAATGGTGAATGGAGAACCATTGAAAAAAACATGGAACTTGATCTCCCTAGTCAATTCTTTGTTGGTAAGAAGAACACCCTTGTTTTCTGGTGGAAAAAACAGGGTAACCAACACATCATGACAAGATGGATGATGCATGAGTTTCGTCTCACCACAGTAATTCAACCAACTAAGATATCAGCTGTTGGTGCATATCGCATATTTAAGAGGAAGTTGGAAAAACCTTTGAGGAATAACATCATCAGACCAGTTGTGATTGATTTCACAATGGAAGATGCAACTGCCTGTCCCCCTCCACCTCCAATGTCTCCTTGA 594 0.4057 MALDFLAEFDQPDCRRLPVGYRFDPTDDVLVCFYLKKKVYNLTLPYHAILDFDVFQTEPWLLPGDLNAFKDRRYYFFDIRQREFDNMDIRPAGNGEWRTIEKNMELDLPSQFFVGKKNTLVFWWKKQGNQHIMTRWMMHEFRLTTVIQPTKISAVGAYRIFKRKLEKPLRNNIIRPVVIDFTMEDATACPPPPPMSP 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01762 197 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 17 169 - -
Car03g01762 197 ProSiteProfiles NAC domain profile. 17 163 IPR003441 GO:0003677|GO:0006355
Car03g01762 197 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 17 169 - -
Car03g01762 197 SUPERFAMILY NAC domain 14 149 IPR036093 GO:0003677|GO:0006355
Car03g01762 197 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
Car03g01762 197 Gene3D NAC domain 26 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01762 Car-Chr3 63485625 63487073 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01762 17 154 NAC Transcription Factor Family AT3G04070 34.028 6.32e-22 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car03g01762 NAM 6.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01762 - - cam:101501671 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01762 03 63485625 63487073 Car02g00531 02 6343292 6345689 PCT