Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01749 ATGGATAGACAAATTGAGTCATATTCACCTAATACATTAGTACAATGTCGAATATGTCACGACGAAGATGAAGATTCAAACATGGATACACCTTGTTCTTGTAGTGGCACCTTGAAGTATGCACATCGAATATGTGTTCAAAGATGGTGCAATGAGAAAGGTGATACTACTTGTGAGATTTGCCAACAGCAACTTAAGGGATATATTGCTCCTCCACTAGCTCCTTTATTCCATTATGGAGGCAATTGGGACATTCCAAGAATTGGTTTTAATAATCATCACTTCATAGCATTGTTTCCTGATAATCATGAATTCGACTTTGAATATTCAGCACCCTCTACAACCAGTATCATGTTGTTCCGCATTGTTTCCATTGTGTTTATTGTTCTGCTTGTTTTACGGCACACACTTCCAATCATGATTATACTCGATGGAGTAGGAGAGTATTCTTTAACAGTGCTTATGGTAAGAGAATAA 477 0.3711 MDRQIESYSPNTLVQCRICHDEDEDSNMDTPCSCSGTLKYAHRICVQRWCNEKGDTTCEICQQQLKGYIAPPLAPLFHYGGNWDIPRIGFNNHHFIALFPDNHEFDFEYSAPSTTSIMLFRIVSIVFIVLLVLRHTLPIMIILDGVGEYSLTVLMVRE 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01749 158 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED 8 156 - -
Car03g01749 158 CDD RING_CH-C4HC3_MARCH 16 62 - -
Car03g01749 158 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 70 IPR013083 -
Car03g01749 158 ProSiteProfiles Zinc finger RING-CH-type profile. 8 68 IPR011016 GO:0008270
Car03g01749 158 Pfam RING-variant domain 16 61 IPR011016 GO:0008270
Car03g01749 158 SUPERFAMILY RING/U-box 13 65 - -
Car03g01749 158 SMART ringv_2 15 62 IPR011016 GO:0008270
Car03g01749 158 Pfam Protein of unknown function (DUF3675) 67 156 IPR022143 -
Car03g01749 158 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 8 156 IPR033275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01749 Car-Chr3 63313299 63315575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01749 16 62 C3H Transcription Factor Family AT2G37950 50.000 3.99e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01749 - - lja:Lj1g3v3244520.2 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01749 03 63313299 63315575 Car03g01749 03 63313299 63315575 ECH