Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01747 ATGATCAATTGTTATTCAATACTGCCTATAAAATATCTCTTGCTTCGCCTTATATCGCCGCACCTTCTCGTTTCAAATATTCACTTTCGCCTCCTCTCTCTTCTCTATCTCCTGCAGGATTCCTGCAAGTTCtgcagtagcagattccgaggtgaaggtgaagttgcagttTCTTTCATGTTTGAACAAGCAATCATCCATTTGGGAGCCATTGAGTTGCTTGGAGAGTGTTTTTCTTCGTCTAGGAAAAAGAACAAGCCTTTGCCGAGAAAACTCAGCTGTATGCATCGTGCCCCATACCAGGAACATACTGATATCTGTAGTTTCTATTTGCAGCCTCCCAACATTGGTGCTGGAAACAGCGATGATGCCTTCTACAGGTATAAGATGCCTAGAATGATTACAAAAATTGAGGGCAGGGGTAATGGCATCAAAACAAATATTGTCAATATGGTTGAAATTGCAAAAGCTTTGGCAAGGCCACCCTCTTACACAACAAAGTATTTTGGTTGTGAACTTGGAGCACAGTCAAAGTTTGATGAGAAAAACGGGACTTCCCATGTCAATGGATCGCATGATACTGCAAAACTTGCTGGTCTTCTCGAGAATTTCATTAAGAAATATGTCCAGTGTTATGGTTGTGGAAATCCTGAAACTGAGATCTTGATTACTAAGAGTCAAATGATCCAGTTGAAATGTGCTGCTTGTGGTTTTGTGTCTGACGTCGATATGAGAGACAAGCTGACTACCTTCATCATTAAGAATCCACCTGAAGTGAAGAAAGGGTCCAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAGGAGAGGCTGAAGGAAGGTGAAGCGGCTGATGAGGAGCTTAAAAAATTGAAGAAAGAGGTCAAGAAGAAAGTAACTTCAAAGGAAAGCACCACAAAATCAAGCTCTTCAAGGAAAAAAGGGAATGGATCTGATGAAGATCATACTTCTCCTACCCACAGTCCAATtgatgagaatgatgaagctgaagatgaagatgatgatgTACAATGGCAAACAGACACATCACTGGAGGCTGCTCGGCTACGAATCCAGGAACAGTTAAGTGCTGTCACAGCTGATATGGTCATGCTCTCCACAAATGAACCAGAGAAGGAGAAAGCAGCCACTAAGGTAAGTGACACTCCTAATAATGGTAATGGTAACACCATTAACTACAAGACTCTGGTTGGGGAACTCAAAGCAAATTTGAAGAAAGGTGTCTCGGCCAAAGAATTGGTGTCCCAATGGGCAAAACTTCCTGTCTCTGCCCAAGAAAAGATGAGTGCTCTATATGAAGCCCTTTTTGGGGATATTGAGAAAGGGTTTGCAAAAGAAGCGCTTAAGAAGAAGAGTTACCTTGCTGCTGCTGTTGCTCAGGAAGAGGGTATGCCATTGTTGTTGTTGCGTGCAATTGAGGAATTTTCTTGCAAGTCCTCTTCCAATGCACTTAAGGAGGTTGCCCTGGTTTTGAAGGCACTCTACGATGCTGATGCCTTGGAGGAAGAGCACATATTGCAGTGGTATCAGGAAGGGCTGAAAGGCGATGACAAGAACTCTCAACTTTGGAAGAATGTTAAGCCTTTCATTGATTGGCTTCAGAGTGCAGAATCAGAGTCCGAGGAAGAATAG 1650 0.4091 MINCYSILPIKYLLLRLISPHLLVSNIHFRLLSLLYLLQDSCKFCSSRFRGEGEVAVSFMFEQAIIHLGAIELLGECFSSSRKKNKPLPRKLSCMHRAPYQEHTDICSFYLQPPNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVEIAKALARPPSYTTKYFGCELGAQSKFDEKNGTSHVNGSHDTAKLAGLLENFIKKYVQCYGCGNPETEILITKSQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPEVKKGSKDKKAMRRAEKERLKEGEAADEELKKLKKEVKKKVTSKESTTKSSSSRKKGNGSDEDHTSPTHSPIDENDEAEDEDDDVQWQTDTSLEAARLRIQEQLSAVTADMVMLSTNEPEKEKAATKVSDTPNNGNGNTINYKTLVGELKANLKKGVSAKELVSQWAKLPVSAQEKMSALYEALFGDIEKGFAKEALKKKSYLAAAVAQEEGMPLLLLRAIEEFSCKSSSNALKEVALVLKALYDADALEEEHILQWYQEGLKGDDKNSQLWKNVKPFIDWLQSAESESEEE 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01747 549 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 120 211 IPR016189 GO:0003743|GO:0006413
Car03g01747 549 CDD W2_eIF5 398 542 - -
Car03g01747 549 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 208 243 IPR016190 GO:0003743|GO:0006413
Car03g01747 549 Gene3D - 114 214 - -
Car03g01747 549 Pfam eIF4-gamma/eIF5/eIF2-epsilon 474 549 IPR003307 GO:0005515
Car03g01747 549 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 115 549 IPR045196 GO:0003743|GO:0006413
Car03g01747 549 ProSiteProfiles W2 domain profile. 392 549 IPR003307 GO:0005515
Car03g01747 549 SUPERFAMILY ARM repeat 398 543 IPR016024 -
Car03g01747 549 MobiDBLite consensus disorder prediction 258 330 - -
Car03g01747 549 Gene3D - 215 255 - -
Car03g01747 549 Pfam Domain found in IF2B/IF5 121 237 IPR002735 GO:0003743|GO:0006413
Car03g01747 549 SMART eIF2Bneu4 125 239 IPR002735 GO:0003743|GO:0006413
Car03g01747 549 MobiDBLite consensus disorder prediction 257 343 - -
Car03g01747 549 Gene3D - 394 540 - -
Car03g01747 549 Coils Coil 277 297 - -
Car03g01747 549 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 115 549 - -
Car03g01747 549 SMART 542_3 457 545 IPR003307 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01747 Car-Chr3 63302272 63306409 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01747 115 542 Eukaryotic Initiation Factors Gene Family AT1G36730 63.470 2.57e-173 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01747 K03262 - gmx:100796346 646.351