Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01728 ATGAAACCTCTACTTCATCATCCATCTTCTTCTTCCATTATTTTCTATTTCTCTATCACACTTTTGATGATCTCAATCATGAATATTCCAACATGTATTTGCAAAGATGATCCCCAATACACAAACTGTAACACCGCTTTTGACTGCAACAGCAGCGTCCCAGACCTCAAGTATCCGTTCTGGGGAGGAAACAGAGCCAAATACTGCGGTGGTGATTCTAATACAGAGGTCATGTGCGAAGGAAAAGTGCCGAAGATAACAATTAAAAACGTGAAATACCGTATTCTTGATTGGGAAAATACAACAAAGAAACTGACTGTAGCTAGAGAAGATTACTCGAGTGGCGATGTTTGTGCTGTTAATAACAATTACAGTAACAGCACATTCGATAACACTGGTCAGTTTCAACGATTTAGCGGTGTTTCAAACGTGACTCTGTTATATAACTGCGTTCCAAATGGAGACCCATCGAATATGTTTCATAGTGTTGACTGCCATAATACTAAATTTGTTGTCTACACCGTTGTTGATCCTACTTTGTATTCCACCATATGTAGTCCAAGTGTTATTGTCGTCATTCCCATTTTGGAAACCTTTACTTCACAACTTGCATCTGGTAGTGGATTAGACGATGCATTAGAAAAAGGTTTTGAGTTGAGATGGAATGTAAACTCTCCGGAATGTGACCGATGCGTTGGATCTGGTGGACTGTGTGGCAACGATGGAGGAACTGGATTCAGATGTTTCTGTAAGGATGTACCTTATAAAGATATGTGCAATTCAGAAAAGGCACCAACCTCAAGTAAAAACTCTAACACTGGCGTTATAATAGGCATAGTTGCAGGAGTTGCTGTCCTTGCTTGCATTCTAGGATTTGCATGCTTTGTAGTGCGGCGAAGGAGGAAAAATGCTGAGAAATCAAGAAGCAATGACCTCTTCATGCCACCTGCAAGCAATGgcactagcactaacactagcactagcactagcactggcactggcactggcactCTAACCTCCAGTACTAATTTGTCTCAGAGTATTCCTTCTTACCCCTCTTCCAAATCCAACACAGCGCCAAAGAGTTTCTACTTTGGTGTCAAGGTATTCACCTATGCTGAACTAGAAGAAGCTACCGAAAATTTCCACACTTCTAAAGAAATTGGAGAGGGAGGTTTTGGCACTGTTTACAAAGGTGAACTCAATGACGGGCGTGTGGTTGCAGTGAAGCGCCATTACGAAAGCAACTTTAAACGCGTGGAACAGTTCATGAATGAAGTTGAGATTCTAGCACGTTTAAGGCATAAGAACCTGGTGACACTCTATGGATGTACCTCAAGACATAGCAGAGAGCTTCTGCTTGTTTATGAATACATACCTAATGGAACAGTAGCTGATCATCTTCATGGGAACCGATCGAGCTCGACTTTGCTTCCTTGGGCTGTAAGGTTGAACATTGCAGTAGAAACAGCTGAGGCATTAGCCTTCCTCCATGCATCTGATGTCATGCACCGAgacgttaaatccaacaacattctcctagacgagaaatttcatgttaaggttgctgattttggcctctcaaggttgtttccaactgatgtcacacatgtaacaactgctccacaaggaacacctggttatgttgatcctgagtattatcagtgttaccaactcaccgacaagagcgatgtttatagctttggagtAGTCTTAGTCGAGCTTATATCGTCATTACAAGCCGTGGATATTACACGGCATCGCAATGACGTGAACTTAGCCAACATGGCTGTCAATAAAATTCATAGCCAAGAACTGCATGATTTGGTTGATCCATTACTTGGATTTGAAAAAGACAATAGTGTGAGAAGAATGACAACATCAGTGGCTGAATTGGCATTTAGGTGTTTGCAGCAACAAAGAGAGATGAGACCTTCAATGGATGAGGTGCTGGAGATATTGAGAGCAATAAAAAGCGATGAACTCGACACGAAGGAAGCACAAGAAGTTGATGTTGTTGTTAGAACAGATGAACTTGTACTTTTGAAGAAGGGTCCTTATCCAACTTCACCAGATTCTGTTGCTGACAAATGGGTTAGCGGTTCTTCTACATCTACTTCCTCATAG 2127 0.3662 MKPLLHHPSSSSIIFYFSITLLMISIMNIPTCICKDDPQYTNCNTAFDCNSSVPDLKYPFWGGNRAKYCGGDSNTEVMCEGKVPKITIKNVKYRILDWENTTKKLTVAREDYSSGDVCAVNNNYSNSTFDNTGQFQRFSGVSNVTLLYNCVPNGDPSNMFHSVDCHNTKFVVYTVVDPTLYSTICSPSVIVVIPILETFTSQLASGSGLDDALEKGFELRWNVNSPECDRCVGSGGLCGNDGGTGFRCFCKDVPYKDMCNSEKAPTSSKNSNTGVIIGIVAGVAVLACILGFACFVVRRRRKNAEKSRSNDLFMPPASNGTSTNTSTSTSTGTGTGTLTSSTNLSQSIPSYPSSKSNTAPKSFYFGVKVFTYAELEEATENFHTSKEIGEGGFGTVYKGELNDGRVVAVKRHYESNFKRVEQFMNEVEILARLRHKNLVTLYGCTSRHSRELLLVYEYIPNGTVADHLHGNRSSSTLLPWAVRLNIAVETAEALAFLHASDVMHRDVKSNNILLDEKFHVKVADFGLSRLFPTDVTHVTTAPQGTPGYVDPEYYQCYQLTDKSDVYSFGVVLVELISSLQAVDITRHRNDVNLANMAVNKIHSQELHDLVDPLLGFEKDNSVRRMTTSVAELAFRCLQQQREMRPSMDEVLEILRAIKSDELDTKEAQEVDVVVRTDELVLLKKGPYPTSPDSVADKWVSGSSTSTSS 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01728 708 Pfam Wall-associated receptor kinase C-terminal 181 252 IPR032872 -
Car03g01728 708 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 20 708 - -
Car03g01728 708 MobiDBLite consensus disorder prediction 306 356 - -
Car03g01728 708 SMART serkin_6 382 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01728 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Car03g01728 708 Gene3D Transferase(Phosphotransferase) domain 1 459 673 - -
Car03g01728 708 ProSiteProfiles Protein kinase domain profile. 382 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01728 708 MobiDBLite consensus disorder prediction 312 356 - -
Car03g01728 708 CDD STKc_IRAK 388 654 - -
Car03g01728 708 MobiDBLite consensus disorder prediction 684 708 - -
Car03g01728 708 ProSitePatterns Protein kinases ATP-binding region signature. 388 410 IPR017441 GO:0005524
Car03g01728 708 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 20 708 IPR044652 -
Car03g01728 708 Gene3D Phosphorylase Kinase; domain 1 353 458 - -
Car03g01728 708 SUPERFAMILY Protein kinase-like (PK-like) 358 659 IPR011009 -
Car03g01728 708 Pfam Protein kinase domain 382 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01728 Car-Chr3 63127040 63135331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01728 55 708 Receptor kinase-like Gene Family AT1G25390 40.030 6.10e-148 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Car03g01728 Pkinase 8.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01728 - - cam:101490779 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01728 03 63127040 63135331 Car03g01728 03 63127040 63135331 ECH