Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01711 ATGTTGTTTTCTACCACCAAAGACTCAAACTTTGCATGTTTAGAACACATTCAACAATACCTTCTTCACGATGATTCCGACATTCCTACATCACATCAACATATTCAAACCCCTAAACTTGAAAATAATTCAAACACAACTGCAGCTGCGCGTAAGGTGCACGCACCTCCAATTTGGAAGCGTTACCGTGGCGTGAGACGTAGGCCATGGGGGAAGTTTGCGGCGGAGATTAGAGACCCTAAGAAAAATGGTGCTAGGGTTTGGCTTGGGACTTATGTGACTGAGGAGGAAGCAGGTTTGGCTTACGACAAAGCTGCTTTTAAAATGCGTGGTCGAAAGGCCAAACTTAATTTTCCCCACCTCATTGGCTCTGATGTGGCAACGTCAGAGTCAAAGAGGGAGGTGGCTTTGAAACGGTGTTCGCCAGAACCTTCTTCCTCGTCGGAGGATAGTTGTGAGTCATCATCACAAGGGTCAAAGAGGAGGAGCATGGTTAATCTACTTAACAAATTAGCCAATAATAGAAGCCAAGCTATGGTGTTTGAAATTGAAATGGCATCACAAGAAAATGCTATTGAGCAATGGGTGAATGAGTTGAATGAGCAAGCTACTTGTGTTTGTTCATTTTAA 630 0.4365 MLFSTTKDSNFACLEHIQQYLLHDDSDIPTSHQHIQTPKLENNSNTTAAARKVHAPPIWKRYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYVTEEEAGLAYDKAAFKMRGRKAKLNFPHLIGSDVATSESKREVALKRCSPEPSSSSEDSCESSSQGSKRRSMVNLLNKLANNRSQAMVFEIEMASQENAIEQWVNELNEQATCVCSF 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01711 209 MobiDBLite consensus disorder prediction 141 161 - -
Car03g01711 209 PANTHER DNA-BINDING DOMAIN 3 177 IPR044808 GO:0003700|GO:0009873
Car03g01711 209 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Car03g01711 209 PRINTS Ethylene responsive element binding protein signature 101 121 IPR001471 GO:0003700|GO:0006355
Car03g01711 209 ProSiteProfiles AP2/ERF domain profile. 61 119 IPR001471 GO:0003700|GO:0006355
Car03g01711 209 SUPERFAMILY DNA-binding domain 61 120 IPR016177 GO:0003677
Car03g01711 209 Gene3D AP2/ERF domain 60 120 IPR036955 GO:0003700|GO:0006355
Car03g01711 209 PANTHER AP2-DOMAIN DNA-BINDING PROTEIN 3 177 - -
Car03g01711 209 SMART rav1_2 61 125 IPR001471 GO:0003700|GO:0006355
Car03g01711 209 MobiDBLite consensus disorder prediction 139 161 - -
Car03g01711 209 CDD AP2 60 121 IPR001471 GO:0003700|GO:0006355
Car03g01711 209 Pfam AP2 domain 61 111 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01711 Car-Chr3 62989472 62990517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01711 35 153 AP2-EREBP Transcription Factor Family AT2G44840 60.000 1.02e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car03g01711 AP2 2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01711 K09286 - gmx:102663872 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01711 03 62989472 62990517 Car03g01711 03 62989472 62990517 ECH