Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01689 ATGGAGGAAGTAGTGGGGTTTTCATACGAAGAAGCGATTAATGCGTGTGGGAGGTTGCCCGCAATATTGGGATACGATGTGGAGAATAATTTATGGCCGAAATTTGTGTATTTGGTTAAAGAAATGGAGAGGGAATTGGAAGAGTTGAAAAAGTTTCCTCAGTATTTTGGGTTTAGTTTGGAGAAGAGAATTGTGCCAAGACATTTGCATTTGAAGGAAAGAGGTGTTAGAATTCCGTTGAATAGAATGTTGATGTGGGGTGATGATAAGTTCTACACCAAGTGGAAGTGA 291 0.3986 MEEVVGFSYEEAINACGRLPAILGYDVENNLWPKFVYLVKEMERELEELKKFPQYFGFSLEKRIVPRHLHLKERGVRIPLNRMLMWGDDKFYTKWK 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01689 96 Gene3D Transcription termination factor 3, mitochondrial 1 96 IPR038538 -
Car03g01689 96 SMART mt_12 13 45 IPR003690 GO:0003690|GO:0006355
Car03g01689 96 SMART mt_12 46 77 IPR003690 GO:0003690|GO:0006355
Car03g01689 96 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 5 96 - -
Car03g01689 96 Pfam mTERF 5 91 IPR003690 GO:0003690|GO:0006355
Car03g01689 96 PANTHER CGI-12 PROTEIN-RELATED 5 96 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01689 Car-Chr3 62580077 62580367 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car03g01689 mTERF 5.8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01689 K15032 - gmx:100812333 163.696