Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01680 ATGTTATCAGAGTTGATGAACTATTTGACAGTGTGTTTTCGGCCGCGTTTGGATCGATATACACGCAGTGGTTCAGATGCTGGCGGTAAACAGGATGGACTTTTGTGGTACAAAGACTCAGGGAGGCACTTGAATGGTGAGTTTTCGATGGCTGTGGTCCAAGCCAACAACTTGTTGGAGGACCAGAGCCATATTGAATCGGGTAGTTTGAGCTCCAATGATTCTGGACCGTATGGTACGTTTGTTGGTGTCTATGATGGACATGGAGGGCCTGAGACATCAAGGTTTATCAATGATCACTTAGTTCACCATCTCAAGAGGTTTACTGCGGAGCAACAATCGATGTCAGTAGATGTTATTCGCAAGGCAATCCAAGCAACAGAAGATGGATTTATGTCTCTTGTTGCTAAACAGTGGTCAATGAAACCACAAATTGCATCTGTTGGATCATGCTGTCTTGTTGGTGTAATTTGTAATGGAACACTTTATGTAGCAAATCTCGGTGATTCCCGGGCCGTTTTAGGAAGAGCAGTCAAAGCAACCGGGGAGGTTTTAGCTGTGCAATTGTCAACAGAACACAATGCAGCAATAGAGTCTATAAGACAAGAGCTGCGATCTTTGCACCCTGACGATCCAAAAATCGTTGTTTTGAAGCATAATGTATGGCGCGTGCGGGGCCTAATACAAATTTCTAGATCTATTGGTGATGTATATCTGAAAAAGGCCGAGTTCAATAGAGAACCGCTTTATGCAAAGTTTCGACTTCGTCAGCCGTTCAAGATGCCAATATTGAGCTCAGAACCCTCGATATCAGTTCACCAGTTGCAGCCACATGATCAGTTTATTATATTTGCATCTGATGGACTCTGGGAGCACCTTAGCAATCAAGATGCAGTTGATATAGTTAAAAAAAATCCCCGCTCGGGAATTGCAAGGAGGCTTGTGAAAGCTGCACTTCAAGAAGCAGCAGAGAAGCGAGAAATGAGATATTCAGACCTAAAAAATATTGACCGTGGGGTTCGTCGGCATTTCCACGATGATATTACAGTGATTGTGGTGTTCATCGAGTCAAATCTCCGACGAGAGAAGCAGCACTTCGATTCTTTAAAATTCGAACTTTCCTGCATTTGTTTGGTCCATCTCTTAGATCTGTCACAACGCCATCATCAACCTCTCTCTCTTCAGATCAAACAAACACACACAGGGTTCTTTCTTCAACTTCCACAAATGGGTGTGGCTCAAAACATTCACGATGAAGAGGGTACCTTGGAGATTGGAATGGAATACAGAACTGTTTCTGGGGTTGCTGGACCACTGGTTATTCTTGAAAAAGTTAAGGGACCTAAGTATCAAGAGATTGTTAATATTCGGTTAGGTGATGGAACTACTAGGCGTGGACAAGTTCTAGAAGTTGATGGTGAAAAAGCTGTTGTTCAGGTCTTTGAAGGCACATCTGGGATTGACAATAAATTCACAACTGTGCAATTTACTGGAGAGGTGTTAAAAACTCCTGTTTCGCTGGACATGCTTGGTCGCATCTTTAATGGTTCGGGAAAACCAATTGATAACGGTCCACCAATATTACCTGAGGCTTATTTGGACATATCAGGAAGTTCCATCAACCCTAGTGAGAGAACCTATCCAGAAGAGATGATACAGACCGGAATATCTACAATCGATGTCATGAATTCTATTGCTAGAGGTCAAAAAATCCCTCTATTCTCAGCTGCTGGTCTCCCCCATAATGAAATTGCTGCTCAGATATGTCGCCAGGCTGGCTTAGTCAAGCGACTAGAGAAAACTGATAATCTTCTCGAGGGTGGAGAAGAGGACAATTTTGCTATTGTGTTTGCAGCCATGGGAGTTAACATGGAGACTGCACAATTTTTCAAACGTGACTTTGAAGAGAATGGCTCTATGGAGAGAGTGACCCTTTTCCTTAATCTGGCAAATGATCCTACAATTGAGCGTATCATCACTCCTCGTATTGCTCTTACTACTGCTGAATATTTGGCATATGAATGCGGCAAGCATGTTCTTGTGATACTCACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTATCTGCTGCCCGAGAAGAAGTGCCAGGTAGACGTGGATATCCCGGTTACATGTATACAGATCTTGCGACAATATATGAACGTGCTGGAAGAATCGAGGGACGAAAGGGCTCTATTACGCAAATTCCAATTCTAACCATGCCTAACGATGATATTACGCATCCAACTCCTGATCTTACTGGATATATCACTGAGGGGCAGATATATATTGACAGGCAGCTGCATAACAGACAGATATATCCACCAATCAATGTCCTTCCGTCGCTGTCTCGATTAATGAAGAGTGCCATTGGGGAGGGAATGACACGAAGGGATCACGCCGATGTGTCCAACCAGCTCTATGCAAATTATGCCATTGGAAAGGATGTCCAGGCAATGAAAGCCGTGGTCGGAGAAGAAGCACTTTCTTCTGAGGATCTGCTGTATCTGGAATTTCTGGACAAGTTTGAGAGGAAGTTTGTCGCGCAAGGAGCTTACGATACCCGCAACATCTTCCAGTCTCTAGATCTTGCATGGACATTGCTTCGGATTTTCCCTCGTGAGCTTCTTCATCGTATACCAGCAAAGACTCTCGATCAGTACTACAACCGAGATGCTGGCAACTGA 2691 0.4374 MLSELMNYLTVCFRPRLDRYTRSGSDAGGKQDGLLWYKDSGRHLNGEFSMAVVQANNLLEDQSHIESGSLSSNDSGPYGTFVGVYDGHGGPETSRFINDHLVHHLKRFTAEQQSMSVDVIRKAIQATEDGFMSLVAKQWSMKPQIASVGSCCLVGVICNGTLYVANLGDSRAVLGRAVKATGEVLAVQLSTEHNAAIESIRQELRSLHPDDPKIVVLKHNVWRVRGLIQISRSIGDVYLKKAEFNREPLYAKFRLRQPFKMPILSSEPSISVHQLQPHDQFIIFASDGLWEHLSNQDAVDIVKKNPRSGIARRLVKAALQEAAEKREMRYSDLKNIDRGVRRHFHDDITVIVVFIESNLRREKQHFDSLKFELSCICLVHLLDLSQRHHQPLSLQIKQTHTGFFLQLPQMGVAQNIHDEEGTLEIGMEYRTVSGVAGPLVILEKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYYNRDAGN 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01680 896 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 502 791 IPR027417 -
Car03g01680 896 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 555 785 IPR000194 GO:0005524
Car03g01680 896 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 414 896 IPR022879 -
Car03g01680 896 CDD ATP-synt_V_A-type_beta_C 795 889 - -
Car03g01680 896 PANTHER V-TYPE PROTON ATPASE SUBUNIT B1-RELATED 414 896 - -
Car03g01680 896 Gene3D - 437 895 - -
Car03g01680 896 CDD PP2Cc 48 355 IPR001932 -
Car03g01680 896 Gene3D - 37 367 IPR036457 -
Car03g01680 896 Pfam Protein phosphatase 2C 63 324 IPR001932 -
Car03g01680 896 CDD ATP-synt_V_A-type_beta_N 428 499 - -
Car03g01680 896 CDD V_A-ATPase_B 500 787 - -
Car03g01680 896 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Car03g01680 896 Pfam ATP synthase alpha/beta family, beta-barrel domain 432 498 IPR004100 GO:0046034|GO:1902600
Car03g01680 896 SMART PP2C_4 39 353 IPR001932 -
Car03g01680 896 TIGRFAM V-ATPase_V1_B: V-type ATPase, B subunit 428 894 IPR005723 GO:0033180|GO:0046961|GO:1902600
Car03g01680 896 Hamap V-type ATP synthase beta chain [atpB]. 426 894 IPR022879 -
Car03g01680 896 ProSitePatterns ATP synthase alpha and beta subunits signature. 776 785 IPR020003 GO:0005524
Car03g01680 896 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Car03g01680 896 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01680 Car-Chr3 62493728 62504207 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01680 409 896 Primary Pumps ATPases(2) AT4G38510 96.516 0.0 972
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01680 K02147 - gmx:100793764 942.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01680 03 62493728 62504207 Car03g01680 03 62493728 62504207 ECH