Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01666 ATGGAGGATTTATTGGAGAGTTTGAGTTCTTATATGGAAATGGAAGATGATGAATTGAATCAAAATAATAGTTCAATTGATGATGAGCAAGAGTTCCTTAAAGATATCATGCTTGAGCAACCTGAATGTAATGCCACTAGCCCCACAAATAGTATTTTACCTTTTGATGAGAAAAGTAATAGCTCCAACTCAATAATGTCTTTGGAAAGATGTGTTTGTTCTCCAGCCACATATCTTTTATCTTTTGATAACTCAAGTGTTGAACCAATCATTGAACAAATGTCAAATAAAAGATCACATGATGGTGTTGAATTTGAACCAAAGGTGAATCAAGCAACAAAAAGGGTTAAAAGGGAATCTGAGATACAAGATCATTTAATGGCTGAGAGAAAAAGGAGAAAGGAATTAACAGAGAGTATCATAGCACTTTCAGCCATTATACCTGGCTTGAAAAAGATGGACAAGTGTTATGTACTTAATGAAGCTATAAACTACACGAAACATCTTCAACAGCGCATTAAAGAATTGGAAAATCAAAACATAGATAAGAGAGTAAAAGATCCAGCAATATTCATATGGAAATCTCAAGCTTCCTCAAATAAAAGCACTACTAGTACCTATTGTGAAAGGAACACTGAATTGCTACTCGAGGTTGAAGCAAGAGTCCTAGAAAAGGAAGTACTCATTAAAATTCATTGTGAGAACCAAAATGACATAGTGCTCAAAATACATGAATTGCTTGAAAAGTTCAATCTCACTATAACCACTAGTAGCATATTACCATTTGGTGCTTCTATTCTTGTAATTAACATTTTTGCTCAGATGGATGAAGAAAACAGCATGACCATGGATGACCTTGTGAAAAATCTGAGAAAACATGTTTTGGAGGCACATGATCGTCAATGA 906 0.3422 MEDLLESLSSYMEMEDDELNQNNSSIDDEQEFLKDIMLEQPECNATSPTNSILPFDEKSNSSNSIMSLERCVCSPATYLLSFDNSSVEPIIEQMSNKRSHDGVEFEPKVNQATKRVKRESEIQDHLMAERKRRKELTESIIALSAIIPGLKKMDKCYVLNEAINYTKHLQQRIKELENQNIDKRVKDPAIFIWKSQASSNKSTTSTYCERNTELLLEVEARVLEKEVLIKIHCENQNDIVLKIHELLEKFNLTITTSSILPFGASILVINIFAQMDEENSMTMDDLVKNLRKHVLEAHDRQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01666 301 Coils Coil 159 186 - -
Car03g01666 301 PANTHER BHLH TRANSCRIPTION FACTOR 14 299 - -
Car03g01666 301 Gene3D - 128 218 IPR036638 GO:0046983
Car03g01666 301 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 14 299 - -
Car03g01666 301 SMART finulus 126 175 IPR011598 GO:0046983
Car03g01666 301 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 120 169 IPR011598 GO:0046983
Car03g01666 301 Pfam Helix-loop-helix DNA-binding domain 125 170 IPR011598 GO:0046983
Car03g01666 301 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 124 185 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01666 Car-Chr3 62372210 62375328 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01666 22 291 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 37.500 6.43e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car03g01666 HLH 6.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01666 - - aprc:113863851 326.25