Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01629 ATGGAAGAAAACAACAACATTAATGAAAAAAAAAATGGGGTTGATGGAAACAATGTATCTGATACGAAAGGTGGAGACTTTTTTGATTTTTCACCAAAAAGAAGCATAGCAGAAAGAAGGGGTTTCAATTCAAATGCAGCAAGGATAAACACAGCACTTTTTCGTGTTGCAATGAATCCTTTAACTTCTCCTTCAGCTCGATCGCCACAACTAACAATACCTTCTGGAATTAGTCCTACTGCATTGCTTGATTCCCCCATCATGCTGCCAAATTCTCAGGCCATGCCTTCTCCCACGACTGGGAGTTTCATGATGCTTCCACCTCTGACTAATGAAGGATCAATGCTCACTTCTGTCACACTTGAGCAAAGGAATATGGATGTGCCTACTGCCTCTGATATTGCCTCCTCTTTCAAATTCAACATTCAACCCAATTTGGATCCTAATTCTTTACCTCCCTATTCTGCTTCTCTAAATCAGGTTTCTAGTAATTTCCACAAGGTAAAAGGAGCACATAGAGACAACCAAATGCTTCTTCAAGATCAGCTACGGTTAGATTTTTCATTCCCAGAAGATTTATCGTATGACTATTTTGCTAAAATCAATGGAGTCCATTTCTACAATGATGTGAAAATGGTAGATGATATGATTGCTGATACCAATAATGTTGAGATACCGATATCTCGTTCTGAAGAAGCTAGCGATGAAAGCAGTCTGCCCGAAAATTCTATCCATAGCGAAGATGTCGGACGACAAGTAGTTTTAGAAGCAGAACAGAAAGAGACGTCTCATGCAACAGGAGTGGTAAGGACCTCAGAAGACGGTTATAACTGGAGAAAATATGGACAAAAACAGGTAAAAGGTAGTGAATATCCAAGGAGCTACTATAAATGTACTCAGACTAATTGTCAGGTCAAGAAAAAGGTGGAAAGATCACTTGATGGACAAATAACAGAAATTATTTACAAGGGTACTCATAACCATGCAAAACCAACTTCTAGTCGTCGAGCATCGGTACCTTCTAATGATGAGATGTCGGAAATCGCTGAAGCTAATGAAACATGTAACAGAGTCGATGCTGATTCTGTTTGGAGAAATATTCAGCCGCAAGTAAAAGATACAAAACACAATTATTTGGATTGGAAGCCTGATGGTCAAGAAAGGACATCCTCAACTTCTGTTGTGACAGAGGTTTCAGATCCTAGGTCGAGGAAGAGAGCTAGATCTCGATATATGTTTGAAACGGACGACACTCTGGAGCTTTCTTCCACACATGGTAATCATGATGGTGATAAAGATGGAGCTAGTCAAGCAGTCTTAGCACTTGAAGAGGATGCTGAATCAGAATCAAAAAGAAGGAAGAAGGAGAGCTGTCCGGTTGAAACAGCTGTGCCTTCCAGGGCTGTTCGCGAGCCGCGAGTGGTTGTCCAAATCGAGAGTGAAGTGGACATACTTGATGATGGTTATCGCTGGCGAAAGTATGGACAGAAGGTTGTCAAAGGGAATCCAAACCCAAGGAGCTACTACAAATGCACAAGTGCTGGATGTTCTGTAAGGAAACATGTGGAAAGGGCTTCACACAATCTAAAATATGTTATAACTACTTATGAGGGAAAACATAACCATGCGGTTCCGACGGCTAGAaataataataacaataataataatagtaatagtaataataatGACAACAATCAGATAAACTCAAGTGATGGTGGCTTACCACCCAGTGGCGCTAACGCGCAAATGGCCAGTTTCCCGAAGTCTGAAGCTCATGAATTGCTTGCGACTAATTTCGACCGAAAACCTCCTGACTTTAGCAATGAGTTTCTACGGTCTAGTTTGATTGGAAGTTTCAGTAATGATATGAAGTTTGGACCTTCCTCCATATCCCAAATGAAATATGCAACCTTGAATAATACCATACCTTATTGCAACTATGGAATGAATCCTGACCGCGGTGCTGCACGTCAAGCTGGACCGATGATGTTCCCTGATTTTCCAGTGCCGCTACAACTGAATCTTCCCTCAGCTGGAAACTATTCTCTAGCAGGGATTAATTTTAACCAAGTAAAACCAATGAGTTCTTCTGTCCAGTCTTTCCTTTCAGGGCAGCAGGGGAAGGACATTGATCCAGGGTTCCTAAGGCCTAAACAGGAGCTGAAAGATGAATCTTTATATAACGCATGCGCGCCGTCTCTTGATCGTGCAAGTCCCACACTCACTCCACCATCATCAGCATCTGCATCACCATCTATTTATCAAAGTATCATGCAAAATTTCCCTTCATAA 2292 0.4101 MEENNNINEKKNGVDGNNVSDTKGGDFFDFSPKRSIAERRGFNSNAARINTALFRVAMNPLTSPSARSPQLTIPSGISPTALLDSPIMLPNSQAMPSPTTGSFMMLPPLTNEGSMLTSVTLEQRNMDVPTASDIASSFKFNIQPNLDPNSLPPYSASLNQVSSNFHKVKGAHRDNQMLLQDQLRLDFSFPEDLSYDYFAKINGVHFYNDVKMVDDMIADTNNVEIPISRSEEASDESSLPENSIHSEDVGRQVVLEAEQKETSHATGVVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQTNCQVKKKVERSLDGQITEIIYKGTHNHAKPTSSRRASVPSNDEMSEIAEANETCNRVDADSVWRNIQPQVKDTKHNYLDWKPDGQERTSSTSVVTEVSDPRSRKRARSRYMFETDDTLELSSTHGNHDGDKDGASQAVLALEEDAESESKRRKKESCPVETAVPSRAVREPRVVVQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHNLKYVITTYEGKHNHAVPTARNNNNNNNNSNSNNNDNNQINSSDGGLPPSGANAQMASFPKSEAHELLATNFDRKPPDFSNEFLRSSLIGSFSNDMKFGPSSISQMKYATLNNTIPYCNYGMNPDRGAARQAGPMMFPDFPVPLQLNLPSAGNYSLAGINFNQVKPMSSSVQSFLSGQQGKDIDPGFLRPKQELKDESLYNACAPSLDRASPTLTPPSSASASPSIYQSIMQNFPS 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01629 763 MobiDBLite consensus disorder prediction 738 753 - -
Car03g01629 763 MobiDBLite consensus disorder prediction 1 30 - -
Car03g01629 763 MobiDBLite consensus disorder prediction 544 576 - -
Car03g01629 763 MobiDBLite consensus disorder prediction 376 467 - -
Car03g01629 763 ProSiteProfiles WRKY domain profile. 267 331 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g01629 763 MobiDBLite consensus disorder prediction 542 583 - -
Car03g01629 763 MobiDBLite consensus disorder prediction 227 246 - -
Car03g01629 763 MobiDBLite consensus disorder prediction 444 460 - -
Car03g01629 763 SUPERFAMILY WRKY DNA-binding domain 270 331 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g01629 763 Pfam WRKY DNA -binding domain 486 542 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g01629 763 Pfam WRKY DNA -binding domain 273 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g01629 763 Gene3D WRKY domain 472 538 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g01629 763 ProSiteProfiles WRKY domain profile. 480 545 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g01629 763 MobiDBLite consensus disorder prediction 733 753 - -
Car03g01629 763 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 17 726 - -
Car03g01629 763 MobiDBLite consensus disorder prediction 384 398 - -
Car03g01629 763 SUPERFAMILY WRKY DNA-binding domain 478 545 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g01629 763 Gene3D WRKY domain 258 332 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g01629 763 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 17 726 IPR044810 GO:0003700
Car03g01629 763 MobiDBLite consensus disorder prediction 399 432 - -
Car03g01629 763 SMART WRKY_cls 485 544 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g01629 763 SMART WRKY_cls 272 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01629 Car-Chr3 62003944 62008246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01629 17 548 WRKY Transcription Factor Family AT5G56270 39.891 1.78e-96 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car03g01629 WRKY 5.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01629 K18835 - gmx:100800211 914.064