Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01612 ATGGTTTCCCTCTCAACCAACCCTTTCTTTTACCTCACTTCACAAACTCCTTCCCTTTCTACTACATTTCATCTCCATCACAACAACGCCAATCCATTCTATCACATTAAACGCATTAATAAGGATCACAGAAATGTTGTCTGTGCTTGCATCGCTCCTCCAAGAAACTTCAACGCTCAAGATTCCTCCGCCATTCAATTCAATGGTTCATCAAAATCAGAACAATTAAGCACAGTGCGGGATCATGAGGATGATTCCGACGTTCTTATTGAGTGTAGAGATGTCTACAAGTCTTTTGGGGAAAAGAAAATCTTAAATGGTGTCAGCTTCAAGATCAGGCATGGTGAAGCTGTTGGAATAATTGGCCCCTCTGGAACTGGCAAATCTACAATTTTGAAGATTATTGCAGGACTTCTTGCTCCGGACAAGGGAGAAGTTTATATCCGAGGTAGAAAGAGAGGTGGTTTGATAAGCGATGATGAGATATCTGGTCTTCGGATTGGATTAGTGTTCCAAAGTGCGGCACTATTTGATTCTTTGACTGTTCGCGAAAATGTTGGTTTCCTCTTGTACGAACACTCGAGCATGCCTGAGGAACAGATATTGGAGCTTGTCAAGGAAACCTTGGCTGCAGTTGGTTTGAAGGGAGTTGAGGATCGACTTCCTTCCGAGTTATCAGGTGGAATGAAAAAGCGAGTTGCTTTAGCTCGATCTATTATTTATGACACCACACAGGATTCAATAGAACCAGAGGTGCTCTTGTATGACGAACCAACAGCTGGACTTGATCCTATCGCATCTACCGTTGTTGAGGATCTGATTCGCTCTGTGCACATAAAAGGGCGAGATGCTCTTGGAAAACCTGGGAATATAACATCTTATGTGGTAGTTACTCACCAACATAGTACCATTAAAAGAGCCATTGATAGGTAA 933 0.4244 MVSLSTNPFFYLTSQTPSLSTTFHLHHNNANPFYHIKRINKDHRNVVCACIAPPRNFNAQDSSAIQFNGSSKSEQLSTVRDHEDDSDVLIECRDVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRGGLISDDEISGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMPEEQILELVKETLAAVGLKGVEDRLPSELSGGMKKRVALARSIIYDTTQDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGRDALGKPGNITSYVVVTHQHSTIKRAIDR 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01612 310 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 90 307 IPR003439 GO:0005524
Car03g01612 310 SMART AAA_5 114 302 IPR003593 -
Car03g01612 310 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 35 310 - -
Car03g01612 310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 310 IPR027417 -
Car03g01612 310 Pfam ABC transporter 105 260 IPR003439 GO:0005524
Car03g01612 310 Gene3D - 76 310 IPR027417 -
Car03g01612 310 ProSitePatterns ABC transporters family signature. 225 239 IPR017871 GO:0005524
Car03g01612 310 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 35 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01612 Car-Chr3 61856580 61862273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01612 89 307 Calmodulin-binding Proteins AT2G36910 29.060 2.45e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01612 - - adu:107486109 501.13