Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01599 ATGAAGCTTCACTACCTCTACATTCTCCTCACAGTCCTGTTTTTCCTATGTATGTTTCCTCAGTCACTCAATTGCCAACAAGTATACCTTAATAACTCTGTCTTTGATTGCTCTAACAACCCTTCTGTACCAAAAGGTTACCTCTGCAATGGCCTTAAAAAATCATGCACTTCCTTTTTGAGTTTTAAGTCAAAACCTCCCTATGATAACCCTATAAGCATCTCCTACCTTATTGGTTCTGAAGCATCAACCATAGCCTCAATCAACAAGATATCAATAAATGAGAAGATTCCTTTTAATAAAACAATCATTGTCCCAGTTTTCTGTTCTTGTGCTGGAAACATATACCAGCATAGCACATCTTACACTGTTAAGAAGAATGACACTTACTTTGAGTTGGTAAAAGAAACTTACCAAGGCCTCACAACCTGTCAAGCATTGATGGGTCAGAATTATTATGCTCCTATCAATATTGCAGTTGGTGCTGAACTCACAGTTCCAGTACTATGTGCTTGTCCAACAGCAAATCTAACAGCAAGAGGGGTTACTTCTTTGCTGGTTCACATGGTGAACTATGGTGACACGGTTAAGTCCATAGGAGAGGCGTATGGTGCTGATGAACAAAGCATGCAAGAGGCCAATGAGTTGCCAGTGCCAACAAGATCAAACAGCAGTGTGATACTCTTTGCATTCACGCCTATATTAGTTCCTTTGAGAGGCAAGAGTTGCAAAGAGAACCCAAATCAATTCTACTGTAAATGTTCCCAGGAACTGCATAGCTCCAGGAGTCTTTTCTGTGATGATTCTCGTGGTCAAAAAGTCCCTGCAAAATTGGTTGCTGCCTCAGGTGTTGGCATTGGTGCAGGCTTTCTATTTTTGTTTCTCTTGGGTTACAAGTTATATCAATATATACAGAAAAGGAGAATGAGCATTCTTAAAGAAAAGTTATTCAGGCAAAACGGTGGCTACTTGTTACAAGAGAAATTATCATCTTACGGAAATGGAGAAATGGCGAAGCTTTTTACCGCAGAGGAGCTGCAAAGAGCAACAGATAACTACAACATGAGTAGGTTTCTTGGTCAGGGTGGCTATGGCACAGTTTATAAAGGAATGTTACCAGATGGAACCATAGTTGCAGTTAAAAAATCCAAAGAAATTGACAGGAACCAGATTGAAACTTTTGTCAATGAAGTTGTCATCTTGTCTCAGATCAACCACAGAAACATTGTCAAACTCTTAGGTTGTTGTCTTGAGACACAAACTCCATTACTTGTCTATGAATATATTCCGAACGGAACACTTTCCCAGCATATCCATAGGAAAGACCATCAGTCGTCATCACTTTCATGGGAAACTCGCCTTCAAATTGCATGTGAAGTCGCTGGAGCGGTAGCATACATGCATTTTTCAGCTTCTATTCCAATCTTCCACAGAGACATCAAACCAACCAACATACTCCTAGACAGTAACTATAGTGCCAAAGTGTCCGATTTTGGAACATCAAGATCAATTCCATTAGATAAGACTCACTTAACCACAGCCGTAGGAGGTACTTTCGGGTACATGGACCCTGAATATTTTCAGTCTAGTCAATTTACAGATAAGAGTGACGTATATAGTTTTGGCATCGTGCTTGTAGAGCTTATAACCGGTAGAAAGCCTATTACGTTCAATGATGAAGATGAGGGTCAGAATATGACAGCACATTTCATTTCTTTGATGAAGGAGAACCAACTTTCTCAAATTTTAGATACCACAGTGCTTAAGGAAGCAAGGAAATATGACATTCTTGCTATTTCTAATCTTGCATTGAGATGTTTGAGACTTAATGGTAAGAAAAGACCAACAATGAAAGAGGTTTCAGCAGAATTAGAAGCACTGAGAAATGTACAAAGTTCCTTACATGTGAAAAATGATCATGATGAGAAAGTAAGTGATGGACAATTATTTGAGCATACATCTAATGACATATTTCATGAATCCACAGTGGAAAGCATTTCTCTATCTCCACAAATGGA 2018 0.3905 MKLHYLYILLTVLFFLCMFPQSLNCQQVYLNNSVFDCSNNPSVPKGYLCNGLKKSCTSFLSFKSKPPYDNPISISYLIGSEASTIASINKISINEKIPFNKTIIVPVFCSCAGNIYQHSTSYTVKKNDTYFELVKETYQGLTTCQALMGQNYYAPINIAVGAELTVPVLCACPTANLTARGVTSLLVHMVNYGDTVKSIGEAYGADEQSMQEANELPVPTRSNSSVILFAFTPILVPLRGKSCKENPNQFYCKCSQELHSSRSLFCDDSRGQKVPAKLVAASGVGIGAGFLFLFLLGYKLYQYIQKRRMSILKEKLFRQNGGYLLQEKLSSYGNGEMAKLFTAEELQRATDNYNMSRFLGQGGYGTVYKGMLPDGTIVAVKKSKEIDRNQIETFVNEVVILSQINHRNIVKLLGCCLETQTPLLVYEYIPNGTLSQHIHRKDHQSSSLSWETRLQIACEVAGAVAYMHFSASIPIFHRDIKPTNILLDSNYSAKVSDFGTSRSIPLDKTHLTTAVGGTFGYMDPEYFQSSQFTDKSDVYSFGIVLVELITGRKPITFNDEDEGQNMTAHFISLMKENQLSQILDTTVLKEARKYDILAISNLALRCLRLNGKKRPTMKEVSAELEALRNVQSSLHVKNDHDEKVSDGQLFEHTSNDIFHESTVESISLSPQM 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01599 672 Pfam LysM domain 188 220 IPR018392 -
Car03g01599 672 Pfam LysM domain 122 167 IPR018392 -
Car03g01599 672 Pfam Protein kinase domain 353 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01599 672 PANTHER LYSM TYPE RECEPTOR KINASE 26 658 - -
Car03g01599 672 CDD STKc_IRAK 359 627 - -
Car03g01599 672 ProSiteProfiles Protein kinase domain profile. 353 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01599 672 SUPERFAMILY Protein kinase-like (PK-like) 336 624 IPR011009 -
Car03g01599 672 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 26 658 IPR045274 GO:0007166
Car03g01599 672 SMART LysM_2 121 167 IPR018392 -
Car03g01599 672 SMART LysM_2 187 237 IPR018392 -
Car03g01599 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Car03g01599 672 ProSitePatterns Protein kinases ATP-binding region signature. 359 382 IPR017441 GO:0005524
Car03g01599 672 SMART serkin_6 353 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01599 672 Gene3D Transferase(Phosphotransferase) domain 1 429 652 - -
Car03g01599 672 Gene3D Phosphorylase Kinase; domain 1 326 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01599 Car-Chr3 61738091 61746745 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01599 275 646 Receptor kinase-like Gene Family AT1G16120 55.228 1.38e-140 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Car03g01599 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01599 - - mtr:MTR_7g079350 1033.48